Pairwise Alignments

Query, 789 a.a., Na+/H+ antiporter from Agrobacterium fabrum C58

Subject, 973 a.a., monovalent cation/H+ antiporter subunit A from Pseudomonas simiae WCS417

 Score =  443 bits (1139), Expect = e-128
 Identities = 290/782 (37%), Positives = 417/782 (53%), Gaps = 27/782 (3%)

Query: 13  LFLPFLAALAAPALVKRFGHNAAWIIAIAPAFAFVHFALMLPQIAAGGVVTGGYAWVPSF 72
           L LPF+ +  A  L     +  + +  +      +  AL+ PQIA GGV+   + W+PS 
Sbjct: 7   LLLPFIGSCLAALLPHNARNTESLLAGLVALVGTIQVALLYPQIAHGGVIREEFMWLPSL 66

Query: 73  NLSFSWFIDGLSLTFALLITGIGVLIVLYAGGYMKGHPQQGRFLSFLLLFMGAMLGVVVS 132
            L+F   +DG +  F++L+ GIG L+ LYA  YM       RF +F L FMGAMLG+V+S
Sbjct: 67  GLNFVLRMDGFAWLFSMLVLGIGTLVSLYARYYMSPDDPVPRFFAFFLAFMGAMLGLVIS 126

Query: 133 DSVLMLFVFWELTSITSFLLIGFDHERAASRRAALQALVVTGGGGLLLLAGLIFIWDISG 192
            +++ +  FWELTS+ SFLLIG+ H RA +RR A  AL+VTG GGL LLAG++ +  I G
Sbjct: 127 GNLIQIVFFWELTSLFSFLLIGYWHHRADARRGAYMALMVTGAGGLCLLAGVMLLGHIVG 186

Query: 193 LTQLSMLVRGGDILRDSPFYLAALLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHS 252
              L  ++  GD +R    Y   L LVL GA +KSAQFPFHFWLP+AM APTPVSAYLHS
Sbjct: 187 SYDLDRVLAAGDQIRAHSLYPVMLALVLIGALSKSAQFPFHFWLPHAMAAPTPVSAYLHS 246

Query: 253 ATMVKAGVYLLMRLNPVLGDTAAWQILLPFFGGLTMLTGALLAVRQTDLKLMLAYTTVSS 312
           ATMVKAGV+LL RL P L  +  W  ++   G LT+L GA  A+ Q DLK +LAY+T+S 
Sbjct: 247 ATMVKAGVFLLARLWPSLSGSEEWFWIVGGAGALTLLLGAYCAMFQNDLKGLLAYSTISH 306

Query: 313 LGLLVMLTGFGSDHAIEAAVLYLVAHSLFKGALFMVAGIIDHETGTRDVTKLAGLRKAMP 372
           LGL+ +L G  S  A  AAV +++ H+ FK +LFM AGIIDHE+GTRD+ KL+GL K +P
Sbjct: 307 LGLITLLLGLNSPLAAVAAVFHILNHATFKASLFMAAGIIDHESGTRDIRKLSGLVKLIP 366

Query: 373 ITFAAALAAAISMAGLPPFFGFLAKEEIYYALAHGNPRA---VLFTGIAILGNGLMFAVA 429
            T   A+ A+ SMAG+P   GFL+KE  +      +  A   +    IA +      A A
Sbjct: 367 FTATLAMVASASMAGVPLLNGFLSKEMFFAETVFISSTAWVEIALPLIATIAGTFSVAYA 426

Query: 430 FAVGLKPFLGKP-VKTPKNAHEGPLLLWLGPALLALKGFTIALF-AGIAHFYISTPMASA 487
               +  F G P    P   HE P  +     LL      + +F A +    ++      
Sbjct: 427 LRFTVDVFFGPPATHLPHTPHEPPRWMRAPVELLVFTCLLVGIFPAQVVGSILAAAALPV 486

Query: 488 IAGEPRPVEISLIPHIGVPLGLSLLTIALGITLY----TQLSRVRSLMDRSFKALGAGPD 543
           + GE     +++      P+ +SL+ ++ G+ LY     QL R R               
Sbjct: 487 VGGELPEYSLAIWHGWNAPMIMSLVAMSGGVVLYLLLRKQLKRGRFKYPPIISYFNG--K 544

Query: 544 RGFDVFIETLVRMSFHVTRLIQPGRL--EFYVTATFAVIAAV--LLVPLFLYDELPSIPA 599
           RGF+  +  ++R    + + I   RL  + ++    AVI  +  +L     + + P IP 
Sbjct: 545 RGFERSLVVMMRGVRKIEKRISTKRLQTQLFLLVLVAVIGGMIPMLNSGLSWGDRPKIPG 604

Query: 600 WPHDMPIHELTFIVIAVAGLLAVLTASSRLTAIIALGIQGFAVAVIFLLFGAPDLSFTQF 659
               +    L  + IA A   A      RL A+  + + G    V F+ F APDL+ TQ 
Sbjct: 605 ---SIVFVTLWLLAIACALGAAWQAKYHRLAALTMVSVCGLMTCVTFVWFSAPDLALTQL 661

Query: 660 MVETLSVVILTLVMTRL-----RLSPSDH---RGLGQKLLDSTIAIACGTGFALFLMRAT 711
           +VE ++ V++ L +  L      +SP  +   +   +++ D  ++   G G AL      
Sbjct: 662 VVEVVTTVLILLGLRWLPRRIEEVSPLPNTLRKARIRRVRDFLLSTVVGGGMALLSYAML 721

Query: 712 QASFDNRLTDFYNTYSKVIAHGANVVNVIIVDFRGTDTLGEIAVVMITGLAILALI-RIR 770
                N ++ FY + +     G+NVVNV++VDFRG DTLGEI V+    L + AL+ R R
Sbjct: 722 TRQTPNDISSFYLSRALPEGGGSNVVNVMLVDFRGFDTLGEITVLGAVALTVYALLRRFR 781

Query: 771 PA 772
           P+
Sbjct: 782 PS 783