Pairwise Alignments

Query, 222 a.a., Hemolysin III from Agrobacterium fabrum C58

Subject, 205 a.a., Channel protein, hemolysin III family from Pseudomonas putida KT2440

 Score =  111 bits (277), Expect = 1e-29
 Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 2/190 (1%)

Query: 23  HGVGIVFALIGATALIFYAMAWGSLSAIAAAWIYGLGLVACLSVSFTYNIWPHSRVKWFL 82
           H VG V A IGA  LI  A   G    I +  IYG  L+   S+S  Y+     R K  +
Sbjct: 12  HLVGAVLAAIGAIWLIVAAGLQGDPWKIVSFSIYGGTLLLLYSISTLYHS-TRGRAKVIM 70

Query: 83  RRLDHSAIFILIAATYTPFLMRGIHDPLIAVMLGLIWLAAICGILLKCLFPGRYDRVAIG 142
           R+LDH +I++LIA +YTPF +  +  P    + G++W  AI G+L +         ++I 
Sbjct: 71  RKLDHLSIYLLIAGSYTPFCLVSLRGPWGWSLFGVVWGLAIIGMLQEIKPRSEARILSII 130

Query: 143 LYLAMGWSGIMVVEPLSSHLAPVTLWLIVAGGVIYSLGVIFHVWE-KLRFQNAIWHGFVV 201
           +Y  MGW  ++ V+PL + L       + AGGV Y++G+IF  ++ + R  + IWH FV+
Sbjct: 131 IYAVMGWIVLVAVKPLLNSLGTAGFAWLAAGGVFYTVGIIFFAFDSRFRHWHGIWHLFVI 190

Query: 202 SAAAVHYFAV 211
           + + +H+ AV
Sbjct: 191 AGSLMHFVAV 200