Pairwise Alignments

Query, 306 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 403 a.a., Cytochrome c family protein from Pseudomonas putida KT2440

 Score =  161 bits (407), Expect = 3e-44
 Identities = 92/259 (35%), Positives = 130/259 (50%), Gaps = 9/259 (3%)

Query: 42  EPDLANGETLFWAGGCASCHAAPDAKGEGLLTLSGGQALKSPFGTFHVPNISSDPQHGIG 101
           +  +  GE L  A  C +CH A     EG    +GG  + SPFGT +  NI+ D Q+GIG
Sbjct: 25  DAQVKRGEYLARAADCMACHTA-----EGGAPYAGGLPIHSPFGTIYGSNITPDKQYGIG 79

Query: 102 GWTLAEFGDAMTRGVAKNGEHLYPSFPYASYARMTQKDINDLFGYLKVLPASQNDAPDHE 161
            ++  EF  A+T G  K+G +LYP+ PY SY  + ++D + +  YL  +P     AP   
Sbjct: 80  NYSADEFFAAVTEGKRKDGANLYPAMPYTSYHLIKREDSDAILAYLMTIPPINRPAPQTA 139

Query: 162 LPFPFNLRMALGGWKFLYFDPAAPPRVELANANAELLRGQYLVEGPGHCGECHTPRDALG 221
           L FPFN+RM L GW  LY         E    +    RGQY+VE  GHCGECHTPR+ +G
Sbjct: 140 LRFPFNVRMGLSGWNMLYGKSVQLQPTE--GKSPAWQRGQYMVEVLGHCGECHTPRNPIG 197

Query: 222 GFLADKWLAGGPNPEGEGRIPDITPGSQSIGSWAEADIASYLETGFTPEFDSVGGSMVKV 281
               D+ L+GG    G    P +     +   W + D+ ++L+ G + +          V
Sbjct: 198 ALQQDQRLSGG--LLGGYLAPSLLAQDLAERGWTQPDLTTFLKHGISAQGSMFNEMFPVV 255

Query: 282 QQNMAHLTTEDRDAIAAYL 300
             +  HL   D  A+A YL
Sbjct: 256 HHSTQHLEDADLAAMATYL 274



 Score = 34.7 bits (78), Expect = 4e-06
 Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 12/118 (10%)

Query: 190 LANANAELLRGQYLVEGPGHCGECHTPRDALGGFLADKWLAGGP--NPEGEGRIPDITPG 247
           LA  +A++ RG+YL      C  CHT   A GG     +  G P  +P G     +ITP 
Sbjct: 21  LAADDAQVKRGEYLARA-ADCMACHT---AEGGA---PYAGGLPIHSPFGTIYGSNITPD 73

Query: 248 SQ-SIGSWAEADIASYLETGFTPEFDSVGGSMVKVQQNMAHLTTEDRDAIAAYLKAIP 304
            Q  IG+++  +  + +  G   +  ++  +M     ++  +  ED DAI AYL  IP
Sbjct: 74  KQYGIGNYSADEFFAAVTEGKRKDGANLYPAMPYTSYHL--IKREDSDAILAYLMTIP 129