Pairwise Alignments

Query, 254 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

Subject, 300 a.a., HTH-type transcriptional regulator PgrR from Pseudomonas sp. DMC3

 Score =  149 bits (377), Expect = 5e-41
 Identities = 89/248 (35%), Positives = 122/248 (49%)

Query: 3   IALVRRTTRSVSLTEAGQQLYADVSPSIGAISQAAQAASSLSGTVRGQLRLAVSSIAERF 62
           I L+ RTTRSVSLT AG++L   V      I     A + L     G +R+       + 
Sbjct: 48  IRLLTRTTRSVSLTAAGERLLHTVGHRFDEIEAELDALTELRDKPAGTVRITCGDNIIKT 107

Query: 63  LSGPLLASFADAHPDVQLDIVVTDEEFDIVAEQYDAGVRLGELIEQDMIAVPVSVPQRQL 122
              P L      +PD++L+  +     DIVA+++DAGVR  + + QDMIAVP+  P R  
Sbjct: 108 TLLPKLTPLLLQYPDIKLEFDINYGFRDIVADRFDAGVRFSDTVAQDMIAVPIGPPLRMA 167

Query: 123 AVCSAEYRDRFGLPTQPRELIDHRCIGWRARPGVAPYRWEFAENGREFAVAVQPDFTTND 182
            V S  Y  R   P  PR+L  HRCI  R         WEF   G++  V V      N 
Sbjct: 168 VVASPGYFARHPAPQHPRDLAAHRCIDIRFPTYDGVDAWEFERQGKKLKVRVDGQLVFNS 227

Query: 183 MQLMIKLACAGAGITFGMEETFRPHLESGKLIAMLEDYSPVFAGFYLYYPSRRHIAPKLR 242
              +   A  G GI +  E+ F  HL  G+L+ +LED+   F GF+LYYPSRR  +P   
Sbjct: 228 TVHIADAAVNGLGIAYLPEDEFGAHLAEGRLVRVLEDWCEPFGGFHLYYPSRRQPSPAFS 287

Query: 243 AFIDHVRL 250
             +D +R+
Sbjct: 288 LVVDALRV 295