Pairwise Alignments

Query, 541 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 833 a.a., DNA ligase D from Pseudomonas putida KT2440

 Score = 54.7 bits (130), Expect = 1e-11
 Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 20/191 (10%)

Query: 217 LDALDPADYAAEWKWDGIRVQLSRAGETRKLYSRSGDDISGAFPDVLDAIEFEGV----M 272
           +D+    D+  E K+DG R+     G+  +L++R+G D S   P  + A+   G+    +
Sbjct: 225 VDSPPSGDWRYEVKFDGYRILARIEGQDIRLFTRNGHDWSSKMPRQVAALRALGIDSAWL 284

Query: 273 DGELLVGGTARSNNLTRTFSDLQQRLNRKTVTAKMRDDYPAFIRAYDLLFEGESDIRAQT 332
           DGE++V   A  N +    +D Q   N        R  Y  F    DL F G  D+R   
Sbjct: 285 DGEMVV---ADENGM----ADFQALQNAFDTEHDERITYYLF----DLPFLGGQDLRQLP 333

Query: 333 YLERRNRLSDIIERAPHDRFDLSPLIGFSSWSELDTLRAAPPDPVIEGVMIKRRDSTYQA 392
              RRN L  ++E    D    S        S LD+         +EG++ KR DS Y +
Sbjct: 334 LQNRRNTLRQLLEHNHCDVIKYSADFDEPVQSLLDSACRLK----LEGLIGKRVDSVY-S 388

Query: 393 GRAKGPWFKWK 403
           GR    W K K
Sbjct: 389 GRRSPDWIKLK 399