Pairwise Alignments

Query, 331 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 350 a.a., ligase-associated DNA damage response exonuclease from Variovorax sp. OAS795

 Score =  266 bits (679), Expect = 7e-76
 Identities = 149/332 (44%), Positives = 193/332 (58%), Gaps = 15/332 (4%)

Query: 6   PKGLYCPAGDFYIDPVRPVARALITHGHSDHARAGHGAVLATRQTLDIMRIRYGEDFCGS 65
           P+GLYCP GDFYIDP RPVARA+ITH HSDHAR GH   LA   +   +R+R G D   +
Sbjct: 10  PEGLYCPPGDFYIDPWRPVARAVITHAHSDHARIGHAHYLAHADSAGTLRVRLGSDI--A 67

Query: 66  EQAVGFGETVEVNGVIVGFHPAGHVLGSAQISVEMNGLRIVASGDYKRGIDPTCAPFETV 125
            Q +G+GE +  +GV V  HPAGHVLGSAQ+ +E  G   VASGDYK   D TC PFE V
Sbjct: 68  LQTLGYGEAITHHGVRVSLHPAGHVLGSAQVRLEHGGRVWVASGDYKTEPDGTCTPFEPV 127

Query: 126 PCDVFITEATFGLPVFHHPLPRVEIGKLLTSIKQFPD--RTHLVGAYSLGKAQRVIRLLR 183
           PCD FITE+TFGLP++  P       ++    +   +  R  ++  Y+ GKAQR++  + 
Sbjct: 128 PCDTFITESTFGLPIYRWPTQAALFAEIDAWWRANAEAGRASVLFCYAFGKAQRILHGV- 186

Query: 184 DNGYADPIYIHGALARLCDYYVSQGIDLGDLRPATLEKSNP----AAFKGAIVVGPPSAF 239
            +    PI +HGA+  L   Y + G+ L    P TL  ++P    A  K A+V+ PPSA 
Sbjct: 187 -DASIGPIVVHGAVEPLNAVYRAAGVAL----PGTLRVTDPGVDAALLKRALVLAPPSAQ 241

Query: 240 QERWARRFNEPLIAFASGWMMVRQRAKQGGVELPLVISDHCDWPELLETITEIGPQAVWV 299
              W RRF     AFASGWM +R   ++ GV+   V+SDH DWP L + I   G   V+V
Sbjct: 242 GTPWMRRFGNYADAFASGWMQLRGTRRRRGVDRGFVMSDHADWPGLQQAIAGTGASRVFV 301

Query: 300 THGREEALVRWCELQGIAAKPLHLVGYEDEGD 331
           THG    +VRW    G+ A+      Y DE D
Sbjct: 302 THGSVAVMVRWLTENGLEAQGFK-TEYGDEDD 332