Pairwise Alignments

Query, 507 a.a., MFS permease from Agrobacterium fabrum C58

Subject, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

 Score =  130 bits (328), Expect = 9e-35
 Identities = 117/421 (27%), Positives = 193/421 (45%), Gaps = 37/421 (8%)

Query: 17  LIVFLFLMLAMFMATLDNQIVSTALPTIVGEFG-ALERFGWIGSAYLLATSAVMPVYGKL 75
           L+  + L LA FM  LD  I + ALPTI G  G + E+  W+ +++ ++ +  +P+ G L
Sbjct: 15  LLTTIGLSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGWL 74

Query: 76  GDLFGRKYVMIAAVVIFTLGSLACGLAWSMDSLIAARVLQGLGGGGIMVSIFSVNADLFE 135
              FG   + I A ++F L S  CG+A SM  L+  RVLQG+  G +     ++   ++ 
Sbjct: 75  SRRFGEVKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVYP 134

Query: 136 PRERARYQSYSSLTIMASGSVGPILGGTMSDLFGWRSIFLINLPLGIIVIAGLALMLPYR 195
           P +R    +  ++  + +   GPILGG ++D + W  IF IN+P+G+   A +   +  R
Sbjct: 135 PAKRGMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAAVVRQQMRTR 194

Query: 196 R--PARQPKIDYLGAVLLAATIASV---------VFWADSSELF-GSLIAAPSLGIIAFA 243
               +RQP +DY+G + L   + ++         + W +SS +  GSLI+   L +    
Sbjct: 195 PVVTSRQP-MDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISVVFLAVFV-- 251

Query: 244 VIAAFLWVQVERRAPEPVVPLRLFKDSTFPL--LMIVSLTSGGIGIGMVNYYALFLQTTT 301
                +W   +R    PVV LRLF    F +  +++V   +G  GI ++     +LQT  
Sbjct: 252 -----IWELTDR---HPVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLI--LPQWLQTQM 301

Query: 302 GLSPSHAGLFFIAVTGGIVMGSLSAGRLISITGVYKPFSVAGLTINVLVMLLFTQMHAG- 360
           G + + AGL    +    V+ S   G+      +     +A L I          M AG 
Sbjct: 302 GYTATWAGLAVAPIGLLPVIMSPFVGKYAHRFDLRVLAGLAFLAIGT-----SCYMRAGF 356

Query: 361 ---TPLWLIAVLMLAQGFAVGLGQQAPIIGVQNSAPKADIGAASGAVTLTRMGGAAIAIS 417
                   +A++ L  G  V L     +  + +  P   I   SG  T  R  G + A S
Sbjct: 357 TSEVDFQHVALVQLFMGIGVALFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAAS 416

Query: 418 V 418
           +
Sbjct: 417 L 417