Pairwise Alignments

Query, 549 a.a., choline dehydrogenase from Agrobacterium fabrum C58

Subject, 548 a.a., choline dehydrogenase from Pseudomonas simiae WCS417

 Score =  363 bits (931), Expect = e-104
 Identities = 199/529 (37%), Positives = 304/529 (57%), Gaps = 6/529 (1%)

Query: 4   DYVIVGSGSAGSAIAYRLSEDGRYSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYL 63
           DY++VG+G AG  +A RLS +  + V+++EAGG D  P+I +P    + +   R +W + 
Sbjct: 9   DYIVVGAGPAGCLLANRLSANPAHRVLLLEAGGRDNYPWIHIPVGYLFCIGNPRTDWCFK 68

Query: 64  SEPEPNLDNRRITAPRGKVIGGSSSINGLVYVRGHAEDFNRWEELGAQGWAYADVLPYFK 123
           +E +  L  R ++ PRGKV+GG SSING++Y+RG A+D++ W   G  GWA+ DVLP FK
Sbjct: 69  TEAQEGLQGRALSYPRGKVLGGCSSINGMIYMRGQAQDYDGWAAEGNAGWAWKDVLPLFK 128

Query: 124 RMEHSHGGEEGWRGTDGPLHVQRGPVSNPLFHAFIQAGAQAGFELTDDYNGSKQEGFGLM 183
           + E+   G   +    G   V++  +  P+  AF  A AQ+G    +D+N    EG G  
Sbjct: 129 QSENHFAGGSEFHSDGGEWRVEQQRLHWPILDAFRDAAAQSGIAPVNDFNQGDNEGCGYF 188

Query: 184 EQTIHNGRRWSAANAYLKPALKRGNVTLVNGF-ARKVIIENGRAVGVEIERRGRVETVKA 242
           +     G RW+AA A+LKP  +R N+T++      +V++ENGRA  V   + G+  + KA
Sbjct: 189 QVNQKAGVRWNAAKAFLKPVRQRPNLTVLTDVDVNRVLLENGRASQVIARQHGQQVSWKA 248

Query: 243 NREVIVSASSFNSPKLLMLSGIGPAAHLKDMGIEVKADRPGVGANLQDHME--FYFQQVS 300
            +E+++ A S  SP +L  SGIGP+  LK +GI+V  + PGVG NLQDH++    ++  +
Sbjct: 249 RKEIVLCAGSVGSPGILQRSGIGPSNVLKPLGIDVLHELPGVGGNLQDHLQLRLIYKLEN 308

Query: 301 TKPVSLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEACAFLRSAPGLKQPDIQYHFLPVA 360
            + ++  +   W   G+ G ++L  + G  +    +  AF RS P     +++YH  P++
Sbjct: 309 ARTLNQIAGTLWGKMGM-GLRYLYDRSGPLSMAPSQLGAFARSGPEQTSANLEYHVQPLS 367

Query: 361 ISYDGKAAAKSHGFQAHVGYNLSKSRGNVTLRSADPHDDPVIRFNYMSHPEDWEKFRHCV 420
           +   G+       F A V     +SRG + +RSA+P D P+IR NY+SHPED       +
Sbjct: 368 LERFGEPLHAFPAFTASVCDLRPQSRGRIDIRSANPADAPLIRPNYLSHPEDLRVAADAI 427

Query: 421 RLTREIFGQKAFDDFRGPEIQPGENIETDEQIDAFLREHLESAYHPCGTCRMGDRNDPMA 480
           RLTR I    A   F+  E  PG++++++EQ+         + +HP GTCRMG   D  A
Sbjct: 428 RLTRRIVAAPALSQFKPVEYLPGDSLQSEEQLHEAAARIGTTIFHPVGTCRMGSDKD--A 485

Query: 481 VVDPECRVIGVEGLRVADSSIFPHVTYGNLNGPSIMTGEKAADHILGKT 529
           VVD + RV GV GLR+AD+S+ P +T GN   P++M  EKAA  IL  T
Sbjct: 486 VVDAQLRVHGVPGLRIADASVMPRITSGNTCSPTLMIAEKAAQLILSPT 534