Pairwise Alignments

Query, 549 a.a., choline dehydrogenase from Agrobacterium fabrum C58

Subject, 580 a.a., Oxidoreductase, GMC family from Variovorax sp. SCN45

 Score =  374 bits (961), Expect = e-108
 Identities = 217/541 (40%), Positives = 298/541 (55%), Gaps = 20/541 (3%)

Query: 4   DYVIVGSGSAGSAIAYRLSEDGRYSVIVIEAGGSD----FGPFIQMPAALAWPMSMKRYN 59
           DYV++G+GSAG  +A RLS D    V +IEAG SD          +P    + +   RYN
Sbjct: 9   DYVVIGAGSAGCVLANRLSADPSVRVALIEAGPSDRQFPVNLKTSLPVGNIFLLPHARYN 68

Query: 60  WGYLSEPEPNLDNRRITAPRGKVIGGSSSINGLVYVRGHAEDFNRWEELGAQGWAYADVL 119
           W +  +    ++ R I  PRGK+ GG SS+NG VY+RGH  D++ W  LG  GWAY DVL
Sbjct: 69  WQHGFQGGAAVNGRTIACPRGKLFGGCSSVNGSVYIRGHRLDYDEWAALGNAGWAYEDVL 128

Query: 120 PYFKRMEHSHGGEEGWRGTD-GPLHVQRGPVSNPLFHAFIQAGAQAGFELTDDYNGSKQE 178
           P F++ E+ H G   +     G   V R    N L  AF+QA  QAG    +D+NG+ Q+
Sbjct: 129 PVFRQHENRHAGATPFHAKGAGEFDVSRPNSPNVLSQAFVQAAVQAGHAHNEDFNGASQD 188

Query: 179 GFGLMEQTIHNGRRWSAANAYLKPALKRGNVTL-VNGFARKVIIENGRAVGV-------- 229
           G GL E    +G R S + A+L P L R N+T+  +    K+ ++  RAVGV        
Sbjct: 189 GMGLYELNQRDGVRLSNSRAFLHPVLGRPNLTVFADTLVEKIELKGKRAVGVRIVKNDAG 248

Query: 230 ----EIERRGRVETVKANREVIVSASSFNSPKLLMLSGIGPAAHLKDMGIEVKADRPGVG 285
               E+  R  +    A  EV+++  + NSP+LLMLSGIGP AHL+  GI V+ D PGVG
Sbjct: 249 SERGELGERRLLSLAGAASEVVLAGGAVNSPQLLMLSGIGPGAHLRRWGIPVQLDLPGVG 308

Query: 286 ANLQDHMEFYFQQVSTKPVSL-YSWLPWFWQGVAGAQWLLSKGGLGASNQFEACAFLRSA 344
            NLQDH   +    +    S   S   W     +  ++L ++ G+ +SN  EA  F RS 
Sbjct: 309 QNLQDHPTVFVSHANPSGESYALSGTSWPRMLASPFRYLFNRKGMLSSNAAEAGGFFRSL 368

Query: 345 PGLKQPDIQYHFLPVAISYDGKAAAKSHGFQAHVGYNLSKSRGNVTLRSADPHDDPVIRF 404
           PGL +PD+Q  FL V +  + +   + HGF   V       RG++ L SAD    PV+  
Sbjct: 369 PGLDRPDVQMTFL-VGLKGNARVIPRDHGFMVLVQLLRPAGRGHLELASADAAAKPVMHP 427

Query: 405 NYMSHPEDWEKFRHCVRLTREIFGQKAFDDFRGPEIQPGENIETDEQIDAFLREHLESAY 464
           N++  P D       VR  R IF   A   + G EI PG  ++TD Q++A LRE + +AY
Sbjct: 428 NFLEDPADMATLVRGVREARRIFAGAALAPYSGGEIAPGPQVQTDAQLEAALREQVNTAY 487

Query: 465 HPCGTCRMGDRNDPMAVVDPECRVIGVEGLRVADSSIFPHVTYGNLNGPSIMTGEKAADH 524
           HP GTC+MG   DP+AVVD   RV G+EGLRVAD+S+ P++  GN + P+ M GE+AA  
Sbjct: 488 HPVGTCKMGPATDPLAVVDARLRVHGIEGLRVADASVMPNIVGGNTSAPATMIGERAAAF 547

Query: 525 I 525
           I
Sbjct: 548 I 548