Pairwise Alignments

Query, 549 a.a., choline dehydrogenase from Agrobacterium fabrum C58

Subject, 565 a.a., choline dehydrogenase from Pseudomonas putida KT2440

 Score =  533 bits (1374), Expect = e-156
 Identities = 279/555 (50%), Positives = 372/555 (67%), Gaps = 12/555 (2%)

Query: 4   DYVIVGSGSAGSAIAYRLSEDGRYSVIVIEAGGSD--FGPFIQMPAALAWPMSMKRYNWG 61
           DY+IVG+GSAG+ +A RL+ED   +V+++EAGG D  F    QMPAALA+P+  +RYNW 
Sbjct: 6   DYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNWA 65

Query: 62  YLSEPEPNLDNRRITAPRGKVIGGSSSINGLVYVRGHAEDFNRWEEL-GAQGWAYADVLP 120
           Y ++PEP +D RR+   RGK +GGSS ING+ Y+RG+A DF+ W EL G + W Y D LP
Sbjct: 66  YETDPEPYMDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDWTYLDCLP 125

Query: 121 YFKRMEHSHGGEEGWRGTDGPLHVQRGPV-SNPLFHAFIQAGAQAGFELTDDYNGSKQEG 179
           YF++ E    G   + G +GP+ V      +NPLFHA ++AG QAG+  T+D NG +QEG
Sbjct: 126 YFRKAETRDIGPNDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTEDLNGYQQEG 185

Query: 180 FGLMEQTI-HNGRRWSAANAYLKPALKRGNVTLV-NGFARKVIIENGRAVGVEI---ERR 234
           FG M++T+  NGRR S A  YL  A KR N+T+V +    +V+ +  RA+GV     +  
Sbjct: 186 FGPMDRTVTKNGRRSSTARGYLDQAKKRPNLTIVTHALTDRVLFDGKRAIGVTYLVGDSE 245

Query: 235 GRVETVKANREVIVSASSFNSPKLLMLSGIGPAAHLKDMGIEVKADRPGVGANLQDHMEF 294
            RVE  +A +EVIVS+ +  SP+LL  SG+GP A L+ + I V  D PGVG NLQDH+E 
Sbjct: 246 ERVEA-RARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPGVGENLQDHLEL 304

Query: 295 YFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEACAFLRSAPGLKQPDIQY 354
           Y Q   T+PVSLY  L W+ Q   GA+W+ +  G+GASNQFEA  F+R+ P  K P+IQY
Sbjct: 305 YLQYACTQPVSLYPSLLWWNQPAIGAEWMFNGTGIGASNQFEAGGFIRTRPEFKWPNIQY 364

Query: 355 HFLPVAISYDGKAAAKSHGFQAHVGYNLSKSRGNVTLRSADPHDDPVIRFNYMSHPEDWE 414
           HFLPVAI+Y+G    K HGFQAH+G   S +RG + ++S DP   P I FNYMS  +DW+
Sbjct: 365 HFLPVAINYNGSNGVKEHGFQAHMGSMRSPARGRIQVKSKDPRQHPSILFNYMSTEQDWQ 424

Query: 415 KFRHCVRLTREIFGQKAFDDFRGPEIQPGENIETDEQIDAFLREHLESAYHPCGTCRMGD 474
           +FR  +RLTREI  Q A D +RG EI PG +++TDEQ+D F+REH E+A+HP  +C+MG 
Sbjct: 425 EFRDGIRLTREIMAQPALDPYRGREISPGADVQTDEQLDKFIREHAETAFHPSCSCKMG- 483

Query: 475 RNDPMAVVDPECRVIGVEGLRVADSSIFPHVTYGNLNGPSIMTGEKAADHILGKTPLPRS 534
             D MAVVD E RV G++GLRV D+SI P +  GNLN  +IM  EK +D I G+ PLPRS
Sbjct: 484 -TDDMAVVDGEGRVHGMKGLRVVDASIMPLIITGNLNATTIMIAEKISDKIRGRKPLPRS 542

Query: 535 NQEPWVNPRAAVSDR 549
             + +V   A V  +
Sbjct: 543 TAKYYVAGDAPVKGK 557