Pairwise Alignments

Query, 971 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 957 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  300 bits (768), Expect = 3e-85
 Identities = 194/560 (34%), Positives = 292/560 (52%), Gaps = 14/560 (2%)

Query: 410 ERQSLALT---GSGDTVWDWDVTRDRIVTTPDISNRLGLEPGTMHGAARNWLPRLHPDDR 466
           E+Q LA T    + + +   D     I      S   G E   M G     LP    D R
Sbjct: 400 EQQRLASTVFEAASEGIVILDPDYKLIAVNQAFSRVTGFETDDMIGRNVVELPSSR-DAR 458

Query: 467 DRFKATLDVLLDHRKGRLNHEFRIRAEDGHFH--WLQIRARPVLGSNGEIIRCVGTITDI 524
             F      LL H  G    E     ++G  +  WLQ+    V    G++   VG   D+
Sbjct: 459 RHFPVIRQALLSH--GTWQGELVETRKNGELYPQWLQLNV--VRDVRGKVSHIVGFFADL 514

Query: 525 TEQKNSVERLLQDAMNDNLTGLPNRQVFLDRLQSILNLSPDSEGVRPTVMAIDIDRYKLV 584
           + ++ S ER+      D LTGL NR +F +RL+   +      G    ++ I++DR+KL+
Sbjct: 515 SARRESEERMRYLTHYDELTGLANRSLFRERLREA-HQRVRQGGRNLALLHINLDRFKLL 573

Query: 585 NDTLGIAAGDNILIALTRRLRRLLKPQDTLARLGGDEFGLILTSERDPQRVADFADAVNK 644
           ND+LG    D +L  + RRL   L   DT+ARL GDEF ++  +  +   +A  A  +  
Sbjct: 574 NDSLGHEVADQLLQKMARRLINALPEADTIARLSGDEFAVLFDAYGNLSSLARVATRLLA 633

Query: 645 AIMVPINFANREIILTASIGLVSWIDQQESAAGLLSDAELAMYRAKRAGGNRVEPFRPAF 704
            + VP+     E++++AS+G+    D     + L+S + +AM  AK  GGN  + +  + 
Sbjct: 634 KLRVPVTVEGHELVVSASMGVSLLPDNAREISALVSQSNMAMQHAKHLGGNNFQFYTDSL 693

Query: 705 RTSGTDRLQMESDLRRAIERKELSLAYQPIVKLDDGALAGFEALMRWEHPKRGNIPPSEF 764
           + S  +RLQ+E+ LR+AIE  +L++ YQP + L  G L   EAL+RWEHP+ G +PP +F
Sbjct: 694 QASTLERLQLENHLRKAIEEGQLTVFYQPKLCLATGKLNAAEALIRWEHPQWGMVPPGDF 753

Query: 765 IPIAEASGLIEPLGMFALERAATDLMDWQHAIDKMPIFISVNISSAQLLNNELYNDVRGM 824
           I +AE +GLI PLG F L  A     +WQ      PI +SVN+S  QL   +L + VR +
Sbjct: 754 IGLAEETGLIVPLGEFVLREACWQACEWQRQ-GLAPIRVSVNLSVHQLRQGKLVSLVRQV 812

Query: 825 LTRTRCNPQQLKLELTESVVMENPEQARLVLSKLKETGLSLAMDDFGTGYSSLAYLTRFP 884
           L  T  +PQ L+LELTES ++++ E       +L++ G+ LA+DDFGTGYSSL+YL R P
Sbjct: 813 LEETGLDPQYLELELTESQLLDSVEHIIATFQQLRDLGVKLAIDDFGTGYSSLSYLKRIP 872

Query: 885 FDTIKLDKALVANTSDKRN--VLLRSVIAMARALDMQVVAEGIETPEDAAELARMNCHFG 942
            D +K+D+  +      R    + R++IAMA  L ++VVAEG+E  +    L    C   
Sbjct: 873 VDYVKIDQTFIRGLGQGREDAAITRAIIAMAHGLALKVVAEGVEDQQQLDFLRGERCDEV 932

Query: 943 QSFMFGTPVSGDAALKLLRE 962
           Q ++   P+       LLR+
Sbjct: 933 QGYLISRPMEAKGLADLLRK 952



 Score = 69.7 bits (169), Expect = 9e-16
 Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 8/122 (6%)

Query: 411 RQSLALTGSGDTVWDWDVTRDRIVTTPDISNRLGLEPGTMHGAARNWLPRLHPDDRDRFK 470
           R ++AL  S   +WDW++  D +  T  +    GLEP  +     +  PRLHPDD    K
Sbjct: 279 RLAMALQASELGLWDWNLQTDEVHHT-QLKELFGLEPEYVTAMLSHLKPRLHPDDLPLLK 337

Query: 471 ATLDVLLDHRKGRLNH---EFRIRAEDGHFHWLQIRARPV-LGSNGEIIRCVGTITDITE 526
                L++H KGR      E+R+R  DGH+ W++ R R V    +G + R +GT  DIT 
Sbjct: 338 R---ALVEHLKGRSEDYQVEYRVRHGDGHWVWIEDRGRAVERAPSGRVTRMLGTRRDITA 394

Query: 527 QK 528
            K
Sbjct: 395 GK 396