Pairwise Alignments

Query, 971 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  313 bits (803), Expect = 4e-89
 Identities = 182/479 (37%), Positives = 273/479 (56%), Gaps = 8/479 (1%)

Query: 479  HRKGRLNHEFRIRAEDGHFHWLQIRARPVLGSNGEIIRCVGTITDITEQKNSVERLLQDA 538
            H++G    E  ++  DG  +   +    VL   G++   V   TDI+E+K S +R+ + A
Sbjct: 782  HQRGSWEGEVWLKRRDGDHYPAWVGITAVLDDEGDLASYVCFFTDISERKASEQRIHRLA 841

Query: 539  MNDNLTGLPNRQVFLDRLQSILNLSPDSEGVRPTVMAIDIDRYKLVNDTLGIAAGDNILI 598
              D LT LPNR +F DRL + L  + + +     +M +D+DR+K +ND+LG AAGD +L 
Sbjct: 842  YYDALTHLPNRTLFQDRLYNALQQA-ERQKAWVVLMFLDLDRFKPINDSLGHAAGDRMLK 900

Query: 599  ALTRRLRRLLKPQDTLARLGGDEFGLIL----TSERDPQRVADFADAVNKAIMVPINFAN 654
             +  RL   +   DT+AR+GGDEF L+L    T E    R    A+ +  +++ P    N
Sbjct: 901  DMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNRAIHVAENILGSLVRPFVLEN 960

Query: 655  REIILTASIGLVSWIDQQESAAGLLSDAELAMYRAKRAGGNRVEPFRPAFRTSGTDRLQM 714
            RE  +TASIG+          + L+ +A+ AMY AK  G N  + ++     S  +RL++
Sbjct: 961  REFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNFQFYQAEMNASALERLEL 1020

Query: 715  ESDLRRAIERKELSLAYQPIVKLDDGALAGFEALMRWEHPKRGNIPPSEFIPIAEASGLI 774
            ESDLR A+E+ E  L YQP    D   L G EAL+RW HP RG +PP +FIP+ E  GL+
Sbjct: 1021 ESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLVPPGDFIPVIEELGLV 1080

Query: 775  EPLGMFALERAATDLMDWQHAIDKMPIFISVNISSAQLLNNELYNDVRGMLTRTRCNPQQ 834
              +G + L  A+  L  W  A  ++P  +SVNIS+ Q  + +L   +  +L  +   P  
Sbjct: 1081 VDVGDWVLREASRQLKAWHKAKVRVP-KVSVNISARQFSDGQLGTRIANILEESGLPPAC 1139

Query: 835  LKLELTESVVMENPEQARLVLSKLKETGLSLAMDDFGTGYSSLAYLTRFPFDTIKLDKAL 894
            L+LELTES++M    +A  +L+ LK  GLS+A+DDFGTGYSSL YL +FP D +K+D+  
Sbjct: 1140 LELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTF 1199

Query: 895  VAN--TSDKRNVLLRSVIAMARALDMQVVAEGIETPEDAAELARMNCHFGQSFMFGTPV 951
            V      ++   + R++IAMA +L++ V+AEG+ET E    L    C   Q ++FG P+
Sbjct: 1200 VDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDEVQGYLFGRPM 1258