Pairwise Alignments

Query, 971 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  296 bits (758), Expect = 3e-84
 Identities = 178/479 (37%), Positives = 267/479 (55%), Gaps = 10/479 (2%)

Query: 481 KGRLNHEFRIRAEDGHFH--WLQIRARPVLGSNGEIIRCVGTITDITEQKNSVERLLQDA 538
           KG  + E   R + G  +  W  I A  +    GE+   V   +DI+  K+S + L   A
Sbjct: 153 KGEWSGEIWNRRKSGEIYPQWQTICA--IRDDEGELSHYVAVFSDISAIKHSEQELAYLA 210

Query: 539 MNDNLTGLPNRQVFLDRL-QSILNLSPDSEGVRPTVMAIDIDRYKLVNDTLGIAAGDNIL 597
            +D LTGLPNR +F DRL Q++     +  G    ++ +D+D ++ +ND LG   GD +L
Sbjct: 211 HHDPLTGLPNRLLFTDRLEQALAAAQANKRGC--ALLLLDLDHFQSINDGLGHTIGDQLL 268

Query: 598 IALTRRLRRLLKPQDTLARLGGDEFGLILTSERDPQRVADFADAVNKAIMVPINFANREI 657
             +  RL  +L    TLARLGGDEFG+++ + +   +    A  + + +  P  F    +
Sbjct: 269 KLVGERLGEVLGNGVTLARLGGDEFGVLVENCQQVGQAGKLAQCIIERMREPFQFDGNRL 328

Query: 658 ILTASIGLVSWIDQQESAAGLLSDAELAMYRAKRAGGNRVEPFRPAFRTSGTDRLQMESD 717
            ++AS+G+  +      A  LL +A+ A+Y+AK  G      +          R++  ++
Sbjct: 329 FISASVGISLYPSDALGAEQLLRNADSALYKAKSNGRACYALYTEELTAHAQHRVETAAE 388

Query: 718 LRRAIERKELSLAYQPIVKLDDGALAGFEALMRWEHPKRGNIPPSEFIPIAEASGLIEPL 777
           LRRA+E+ EL + +QP+  L  G   G E L+RW+HP+RG +PP EFIPIAE +GLI  +
Sbjct: 389 LRRALEQDELRVYFQPVHDLASGRQVGVETLVRWQHPRRGLVPPGEFIPIAERTGLIAEI 448

Query: 778 GMFALERAATDLMDWQHAIDKMPIFISVNISSAQLLNNELYNDVRGMLTRTRCNPQQLKL 837
             + L +A   ++ WQ A  +   F+ VNISS     +ELY  V  +L  T   P  L+L
Sbjct: 449 DTWVLRQACRQMVQWQ-AQGRQLAFVGVNISSRLFGQHELYRQVAEVLHDTGLAPALLEL 507

Query: 838 ELTESVVMENPEQARLVLSKLKETGLSLAMDDFGTGYSSLAYLTRFPFDTIKLDKALVAN 897
           E+TES VME+PE A   L +L+E G++LA+DDFGTGYSSL  L R P   +K+D+  VA 
Sbjct: 508 EVTESAVMEDPEVALEQLHRLRELGVTLAIDDFGTGYSSLLRLKRLPVQKLKIDQGFVAG 567

Query: 898 --TSDKRNVLLRSVIAMARALDMQVVAEGIETPEDAAELARMNCHFGQSFMFGTPVSGD 954
               +    ++R +IA+AR++ MQV AEGIE  E A+ L +  C  GQ + FG PV  +
Sbjct: 568 LPVDEDDIAIVRVIIALARSMGMQVHAEGIEQAEQASFLLQEECQLGQGYWFGRPVPAE 626