Pairwise Alignments

Query, 291 a.a., cytochrome c oxidase subunit III from Agrobacterium fabrum C58

Subject, 293 a.a., Cytochrome c oxidase polypeptide III (EC 1.9.3.1) from Variovorax sp. SCN45

 Score =  188 bits (477), Expect = 1e-52
 Identities = 115/300 (38%), Positives = 155/300 (51%), Gaps = 36/300 (12%)

Query: 4   THQKNHDYHIIDPSPWPLLASIGAFIMTFGGVCYMRYLSGGSFKLFGAELANPWLFYIGL 63
           TH     Y +  PS +P+ A+IG F +  G   ++   + G+           W    G+
Sbjct: 5   THGATPYYFVPGPSAYPVSAAIGLFFVILGAAQWINGHAWGA-----------WSLLAGM 53

Query: 64  VIVLYVMYAWWADTIKEANEGSHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYF------ 117
           VI L  ++ W+   I E+  G +   V L  R+ M  FI SEVMFF A+F A +      
Sbjct: 54  VIWLGTLFVWFRAAIGESESGQYGHKVDLSFRWSMSWFIFSEVMFFGAFFTALWWARTHA 113

Query: 118 --------DASLFPH-EAIQASRLEYTGGQWPPKGI----EVIDPWHLPLYNTVILLLSG 164
                   +A L+P  +A+  S     G    P GI    + + P+ LP  NT +LL SG
Sbjct: 114 LPTLGSLDNAILWPDFKAVWPSVA--AGATGSPAGIVEPFQTVGPFWLPTINTALLLSSG 171

Query: 165 TCVTWAHHALLHNDRKGLISGLALTVALGVLFSTVQVYEYIHAPFDFK----NSIYGATF 220
             +T AHHAL    R   I  + +TV LG++F  VQ YEY H   +      +  YG+TF
Sbjct: 172 VTLTIAHHALRAGHRAQTIRFMWMTVLLGLIFLGVQAYEYHHLYTELNLKLSSGTYGSTF 231

Query: 221 FMATGFHGFHVFVGTVFLLVCLFRAIAGGFTPKQHFGFEAAAWYWHFVDVVWLFLFFAIY 280
           FM TGFHG HVF+G + LL    R   G FTP++HFGFE AAWYWHFVDVVWL L+  +Y
Sbjct: 232 FMLTGFHGLHVFIGMLMLLFITLRLRKGHFTPERHFGFEGAAWYWHFVDVVWLGLYMLVY 291