Pairwise Alignments

Query, 291 a.a., cytochrome c oxidase subunit III from Agrobacterium fabrum C58

Subject, 295 a.a., cytochrome c oxidase subunit 3 from Pseudomonas putida KT2440

 Score =  216 bits (551), Expect = 4e-61
 Identities = 115/293 (39%), Positives = 163/293 (55%), Gaps = 27/293 (9%)

Query: 11  YHIIDPSPWPLLASIGAFIMTFGGVCYMRYLSGGSFKLFGAELANPWLFYIGLVIVLYVM 70
           Y++   S WP++A+IG FI  FG   +   +  G     G     P +F++G + + Y++
Sbjct: 7   YYVPAQSKWPIIATIGMFITVFGLGTWFNDMKAGHPDSHG-----PLIFFVGALFLAYML 61

Query: 71  YAWWADTIKEANEGSHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDASLFPHEAIQAS 130
           + W+   +KE+  G ++  +    R+GM  FI SEVMFF+A+F A F   +     +   
Sbjct: 62  FGWFGAVVKESRAGLYSPQLDRSFRWGMSWFIFSEVMFFLAFFGALFYVRVLAGPWLGGE 121

Query: 131 RLE-YTGGQWP-----------------PKGIEVIDPWHLPLYNTVILLLSGTCVTWAHH 172
             +  T   WP                 P   EVIDPWHLPL NT++L+ S   +T AHH
Sbjct: 122 GAKGVTHMLWPTFEFTWPLLHTPDPKLFPPPKEVIDPWHLPLINTILLVSSSVTITIAHH 181

Query: 173 ALLHNDRKGLISGLALTVALGVLFSTVQVYEYIHA----PFDFKNSIYGATFFMATGFHG 228
           AL  + R  L   +ALT+ LG+ F  +Q +EY  A         + IYGATFFM TGFHG
Sbjct: 182 ALRRDHRGPLKFWMALTIVLGISFIALQAFEYYEAYTKLGLTLGSGIYGATFFMLTGFHG 241

Query: 229 FHVFVGTVFLLVCLFRAIAGGFTPKQHFGFEAAAWYWHFVDVVWLFLFFAIYI 281
            HV +GT+ L+V   R + G F P++HFGFEAA+WYWHFVDVVW+ LF  +Y+
Sbjct: 242 AHVTLGTIILIVMFVRILRGHFNPEKHFGFEAASWYWHFVDVVWVGLFIFVYV 294