Pairwise Alignments

Query, 569 a.a., cytochrome-c oxidase chain I from Agrobacterium fabrum C58

Subject, 528 a.a., cytochrome oxidase subunit I from Pseudomonas simiae WCS417

 Score =  612 bits (1579), Expect = e-180
 Identities = 299/548 (54%), Positives = 383/548 (69%), Gaps = 27/548 (4%)

Query: 24  DDHSH-DHSHKPGF-FARWFLSTNHKDIGTLYLIFAIMAGIIGGGLSVVMRMELQEPGIQ 81
           DDH H DH+H P     RW L+TNHKDIGTLYL FA    ++GG  ++V+R EL +PG+Q
Sbjct: 6   DDHGHADHAHGPAKGLMRWVLTTNHKDIGTLYLWFAFAMFLLGGSFAMVIRAELFQPGLQ 65

Query: 82  IFHGLASMVYGFEGDAAIDGGKHMFNVFTTAHALIMIFFMVMPAMIGGFANWMIPIMIGA 141
           I                       FN  TT H LIM+F  VMPA +G  ANWMIP+MIGA
Sbjct: 66  IVQPA------------------FFNQMTTMHGLIMVFGAVMPAFVG-LANWMIPLMIGA 106

Query: 142 PDMAFPRLNNISFWLIVPAFILLLLSLFVEGPAGAYGVGGGWTMYPPLSTSGMPGPAVDL 201
           PDMA PR+NN SFWL+  AF+LL+ +LF  G     G   GWT Y PLST+  P  +V  
Sbjct: 107 PDMALPRMNNFSFWLLPAAFLLLVSTLFTPGG----GPNFGWTFYAPLSTTYAP-ESVTF 161

Query: 202 AIFSLHVAGASSILGAINFITTILNMRAPGMTLHKMPLFAWSVLVTAFLLLLSLPVLAGG 261
            IF++H+ G SSI+GAIN + TILN+RAPGMTL KMPLF W+ L+TAFLL+  +PVLAG 
Sbjct: 162 FIFAIHLMGISSIMGAINVVATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAGC 221

Query: 262 ITMLLTDRNFGTAFFSPEGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSKKP 321
           +TM+L D +FGT+FFS  GGGDP+L+QH+FWFFGHPEVYI+ILP FG +S I+ TFS+KP
Sbjct: 222 VTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSSIIPTFSRKP 281

Query: 322 VFGYLGMAYAMVAIGAVGFIVWAHHMYTVGLSLEAQRYFVFATMVIAVPTGIKIFSWIAT 381
           +FGY  M YA  +I  + FIVWAHHM+ VG+ L  + +F++AT++IAVPTG+K+F+W++T
Sbjct: 282 LFGYTSMVYATASIAFLSFIVWAHHMFVVGIPLVGELFFMYATLLIAVPTGVKVFNWVST 341

Query: 382 MWGGSLTFSTPMVWAIGFIFLFTVGGVTGVQLANAGLDRSLHDTYYVVAHFHYVLSLGAV 441
           MW GSLTF TPM++A+ F+ LFT+GG +G+ LA A  D   HDTY+VVAHFHYVL  GA+
Sbjct: 342 MWQGSLTFETPMLFAVAFVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVPGAI 401

Query: 442 FAIFAGWYYWFPKITGYMYNEFIGKLHFWVMFIGVNLIFFPQHFLGLAGMPRRYIDYPDA 501
           F IFA  YYW PK TG+MY+E +GKLHFW+ F+G+N+ FFP HF+GLAGMPRR  DY   
Sbjct: 402 FGIFASAYYWLPKWTGHMYDETLGKLHFWLSFVGMNMAFFPMHFVGLAGMPRRVPDYNLQ 461

Query: 502 YAGWNMVSSYGSYISAVAVGIFLFGVWEAFAKKRIAGNNPWGEGATTLEWQLSSPPPYHQ 561
           +A +NMVSS G+++       FLF V +       A   PW +GA  LEW + SP PYH 
Sbjct: 462 FADFNMVSSVGAFMFGATQIFFLFIVIKCIRGGTPAPAKPW-DGAEGLEWSIPSPAPYHT 520

Query: 562 WEQLPRIR 569
           +   P ++
Sbjct: 521 FTTPPEVK 528