Pairwise Alignments

Query, 416 a.a., RNA methyltransferase from Agrobacterium fabrum C58

Subject, 361 a.a., tRNA (uracil(54)-C(5))-methyltransferase from Pseudomonas sp. S08-1

 Score = 84.7 bits (208), Expect = 4e-21
 Identities = 98/353 (27%), Positives = 158/353 (44%), Gaps = 31/353 (8%)

Query: 90  AFKRELVVSALRSKGLTPPV---DDLVICRPGE--RRRAVFAA-RKTEKGLLLGFSQANS 143
           A+  +L     R + L  P    +  V   PGE  R RA F   R+ E+     F+  + 
Sbjct: 9   AYAAQLEEKVARLRELLAPFAAPEPAVFDSPGEHYRLRAEFRLWREQEERHYAMFAAGDK 68

Query: 144 HHIVAIEECPVTSPGIVSRFDAIRAIG-LSMVANAEPFRITVLETLSGLDISVEGIKSVN 202
           H  + I+E P+ S  I      ++A    S V + + F++  L TL+G  +         
Sbjct: 69  HTPILIDEFPIASLRINELMPQLKAAWQASRVLSFKLFQVEFLTTLAGDALITLCYHRPL 128

Query: 203 DKQRRTLTETVLAMRGIARVSLS-GEILIEPQKPIIEFGGIP-----VSPPAGGFTQATK 256
           D + +   E +    G++ V  S G+ L+  +  + E   +         P G FTQ   
Sbjct: 129 DAEWQAEAEQLATKLGVSLVGRSRGQRLVIGRDYVQEEMQVAGRTFRYRQPEGAFTQPNG 188

Query: 257 QAEDAMAELMLAHVG-KSKRIADLFCGSGTFALRLA-RIGRVHAVEAEDKALKAL--DFA 312
                M +     +G +   + +L+CG+G F L L+ R+ +V A E    ++ A   + A
Sbjct: 189 LVCQKMLDWAHEALGQRDDDLLELYCGNGNFTLPLSTRVRKVLATEISKSSVNAALANLA 248

Query: 313 ARNTQGLKPVSVEKRDL---------FRRPLMTSELKNYD--AVVFDPPRAGAEVQCKEL 361
                 ++ V +   +L         FRR L   +LK+YD  AV  DPPRAG +    EL
Sbjct: 249 DNGIDNIELVRLSAEELTQALNEVRPFRR-LADIDLKSYDFGAVFVDPPRAGMDPDTCEL 307

Query: 362 ARSTVKKIVAVSCNPLTLARDLAILTEGGYRVTRVTPVDQFLWSPHVEAVAVL 414
            R     I+ +SCNP TLA ++A L +  +R+ R    DQF W+ H+E+  +L
Sbjct: 308 TR-RFDNILYISCNPETLAANIAQLND-THRIERCALFDQFPWTHHMESGVLL 358