Pairwise Alignments

Query, 594 a.a., acyl-CoA dehydrogenase from Agrobacterium fabrum C58

Subject, 589 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

 Score =  444 bits (1142), Expect = e-129
 Identities = 258/596 (43%), Positives = 343/596 (57%), Gaps = 29/596 (4%)

Query: 2   YSAPVDDIAFTLKHVAGLEDALSQ--GVLGDLSEDLVDAILEEAGRFATGEVAPLADIGD 59
           YSAP+ D+ F L  V       ++   +   +  D  DAILEEA +     +APL+  GD
Sbjct: 4   YSAPLRDMRFVLHDVFNASGLWARLPALAERIDADTADAILEEASKVTGQLIAPLSRNGD 63

Query: 60  RQGAKLADGKVTTPDGWADLYRRWAEAGWNSLTAPEEFGGQNLPHMLNVAALEMWNSGSM 119
            QG     G+VTTP+G+ + +  + E GW  L    E+GG  +P ML V   EM  +   
Sbjct: 64  EQGVCFDAGQVTTPEGFREAWNTYREGGWVGLGGNPEYGGMGMPKMLGVLFEEMLYAADC 123

Query: 120 AFALAPTLTMGAVEAIVTHGSNDLKRIYLPKLVSGEWTGTMNLTEPHAGSDLGVLKTRAE 179
           +F+L   L+ G+  AI  H S  LK  YLP L  G W GTM LTEPHAG+DLG+++TRAE
Sbjct: 124 SFSLYSALSAGSCLAIDAHASEALKATYLPPLYEGRWAGTMCLTEPHAGTDLGLIRTRAE 183

Query: 180 RNGDGTYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPTGTRGISLFLVPKFLPDENGA 239
              DG+ RI G KIFIT GE D  +NI+HLVLA++PDAP G +GISLFLVPKFL + +G 
Sbjct: 184 PQADGSVRISGSKIFITGGEQDLTENIVHLVLAKMPDAPAGAKGISLFLVPKFLVEADGR 243

Query: 240 PGSRNDLFCHSLEHKLGIHGSPTCTMIFGDGKFGDEKGALGWLIGEENKGLACMFTMMNN 299
            G+RN + C S+EHK+GI  S TC M F         GA+G+L+GE NKGL  MFTMMN 
Sbjct: 244 LGARNAVHCGSIEHKMGIKASATCVMNF--------DGAIGYLVGEPNKGLTAMFTMMNY 295

Query: 300 ARLAVGMQGVAICEAATQKAIEYAKERTQGKA---PGWQGSGMSPIIEHPDIARTLLTMK 356
            RL++G+QG+   EA+ Q A  YA ER Q +A   P        PII H D+ R LLTM+
Sbjct: 296 ERLSIGIQGIGCAEASYQSAARYANERLQSRAATGPQAHDKAADPIIHHGDVRRMLLTMR 355

Query: 357 ALTQGSRAISFSCAHAIDMAHATEDASQRAHWQERAALLTPIAKSFSTDAGVDVASMGIQ 416
            LT+  RA +      +D+A   EDA +R H Q   ALLTP+AK+F TD G++   +G Q
Sbjct: 356 TLTEAGRAFAVYVGQQLDVARYAEDAGEREHAQRLVALLTPVAKAFFTDNGLESCVLGQQ 415

Query: 417 VHGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLVLRKLPLSEGAQVRGFIAELREI 476
           V+GG G+I E G  + +RD RIA IYEGTNGIQA+DL+ RK+    G  +  F +E+R  
Sbjct: 416 VYGGHGYIREWGQEQRVRDVRIAQIYEGTNGIQALDLLGRKVLADGGQALASFASEVRAF 475

Query: 477 AARTAASNRDDLGETARYLEASLNDLETTTDWLLSRIKAGETETAL-AGATAYQRLFGLA 535
           +         D       L+ASL  LE T+ WL  R +AGE    + A A  Y +LFGL 
Sbjct: 476 SV--------DAPLHREALQASLARLEATSSWL--RAQAGEDANLVSAVAVEYLQLFGLT 525

Query: 536 LTGAYLAKGALVSV-----DDGRSGHRAALCRFTAENLLAETAALKDRVISGAASL 586
                 A+ A V++     DD   G + A   F  + +L     L+  + +G+ SL
Sbjct: 526 AYAYMWARMAAVALAKRDEDDAFHGAKLACAAFYFQRVLPRGLGLEASIRAGSGSL 581