Pairwise Alignments

Query, 594 a.a., acyl-CoA dehydrogenase from Agrobacterium fabrum C58

Subject, 591 a.a., putative acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  451 bits (1160), Expect = e-131
 Identities = 265/598 (44%), Positives = 348/598 (58%), Gaps = 28/598 (4%)

Query: 2   YSAPVDDIAFTLKHVAGLEDALSQGVLG-DLSEDLVDAILEEAGRFATGEVAPLADIGDR 60
           Y AP+ D+ F L  +  L     Q  LG +L  D +D ILEEA RF    +APL    D 
Sbjct: 3   YQAPLRDMRFVLHELFDLSGHCQQ--LGIELDRDTLDGILEEAARFTGQIIAPLNRNSDE 60

Query: 61  QGAKLADGKVTTPDGWADLYRRWAEAGWNSLTAPEEFGGQNLPHMLNVAALEMWNSGSMA 120
           QG +   G+VTTPDG  D YR++ E GW S+T P+ +GGQ LP M + +  EM  + S++
Sbjct: 61  QGCQWVGGEVTTPDGMRDAYRQYVEHGWASMTGPQAYGGQGLPQMASASFHEMLMAASLS 120

Query: 121 FALAPTLTMGAVEAIVTHGSNDLKRIYLPKLVSGEWTGTMNLTEPHAGSDLGVLKTRAER 180
           F +   LT GAV A+  HGS  LK+ YL ++VSGEW GTM LTEP AG+DL +L+TRA+ 
Sbjct: 121 FRIYSGLTEGAVLALHRHGSEPLKQAYLSRMVSGEWAGTMCLTEPQAGTDLALLRTRAQP 180

Query: 181 NGDGTYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPTGTRGISLFLVPKFLPDENGAP 240
             DG+YRI G KIFI+ GE D  DNI+HLVLARLPDAP G RGISLFLVPK LP      
Sbjct: 181 EADGSYRITGSKIFISGGEQDLTDNIVHLVLARLPDAPAGVRGISLFLVPKLLPG----- 235

Query: 241 GSRNDLFCHSLEHKLGIHGSPTCTMIFGDGKFGDEKGALGWLIGEENKGLACMFTMMNNA 300
           G RN L C +LEHK+GI G+ TC M F         GA GWL+GE N+GLACMFTMMN+A
Sbjct: 236 GERNALGCGALEHKMGIKGASTCVMNF--------DGAQGWLVGEANQGLACMFTMMNDA 287

Query: 301 RLAVGMQGVAICEAATQKAIEYAKERTQGKA---PGWQGSGMSPIIEHPDIARTLLTMKA 357
           R  VG+QG+ I EAA Q  + YA+ER Q ++   P        PII HPD+ R LLT K 
Sbjct: 288 RFQVGLQGLGIAEAAFQGGLAYARERLQSRSLAGPVAAEKPADPIIVHPDVRRMLLTQKT 347

Query: 358 LTQGSRAISFSCAHAIDMAHATEDASQRAHWQERAALLTPIAKSFSTDAGVDVASMGIQV 417
           LT+G R +    A  +D+ HA + A  R     RAALL PI K+F TD G +VAS+G+QV
Sbjct: 348 LTEGCRMLGIYTARQLDLEHAAKSAPARQAAARRAALLIPIVKAFFTDVGQEVASLGVQV 407

Query: 418 HGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLVLRKLPLSEGAQVRGFIAELREIA 477
           +GG G+I E G  + +RD+RI  +YEGTNGIQA+DL+ RK+    GA++   I E+    
Sbjct: 408 YGGHGYIREWGMEQLMRDSRITQLYEGTNGIQALDLIRRKVLGDGGAELNLLIDEMAPHV 467

Query: 478 ARTAASNRDDLGETARYLEASLNDLETTTDWLLSRI-----KAGETETALAGATAYQRLF 532
              AA+    L   A  +   L +    +  ++        ++G         +AY  L 
Sbjct: 468 --RAANALGGLQAMATGVGQRLEEWRALSGHVVEACERDPQESGAVSVDFLAYSAYVLLA 525

Query: 533 GLALTGAYLAKGALVSVDDGRSGHRAAL--CRFTAENLLAETAALKDRVISGAASLAA 588
            + L  A  A+  L +     + +RA L    F    +L    A ++ ++ GA  L A
Sbjct: 526 AMWLQAAVRAQATLATGSAETAFYRAKLDAATFYWRRILPRATAHREALLGGADCLMA 583