Pairwise Alignments

Query, 594 a.a., acyl-CoA dehydrogenase from Agrobacterium fabrum C58

Subject, 592 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

 Score =  461 bits (1187), Expect = e-134
 Identities = 265/595 (44%), Positives = 354/595 (59%), Gaps = 24/595 (4%)

Query: 2   YSAPVDDIAFTLKHVAGLEDALSQ--GVLGDLSEDLVDAILEEAGRFATGEVAPLADIGD 59
           Y AP+ D+ F L  V  + +  +Q  G+   +  D   A+LEEAG+     +APL+   D
Sbjct: 4   YKAPLRDMRFVLNEVFNVAEQWTQLPGLAEVVDADTAMAVLEEAGKVTARTIAPLSRAAD 63

Query: 60  RQGAKLADGKVTTPDGWADLYRRWAEAGWNSLTAPEEFGGQNLPHMLNVAALEMWNSGSM 119
            +G    +G V TP G+ + Y  +AE GW  +     FGG  +P  ++    EM N+ S+
Sbjct: 64  EEGCHWDNGAVRTPAGFIEAYNTYAEGGWVGVGGDPLFGGMGMPKAISAQVEEMVNASSL 123

Query: 120 AFALAPTLTMGAVEAIVTHGSNDLKRIYLPKLVSGEWTGTMNLTEPHAGSDLGVLKTRAE 179
           AF L P LT GA  +I  H S  LK  YLP + +G W G+M LTEPHAG+DLG+++T+AE
Sbjct: 124 AFGLYPMLTAGACLSINAHASEALKEKYLPNMYAGVWAGSMCLTEPHAGTDLGIIRTKAE 183

Query: 180 RNGDGTYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPTGTRGISLFLVPKFLPDENGA 239
              DG+Y++ G KIFIT GEHD  +NIIHLVLA+LPDAP G +GISLFLVPKFL +E+G+
Sbjct: 184 PQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFLVNEDGS 243

Query: 240 PGSRNDLFCHSLEHKLGIHGSPTCTMIFGDGKFGDEKGALGWLIGEENKGLACMFTMMNN 299
            G+RN   C S+EHK+GI  S TC M F +        A+G+++GE NKGLA MFTMMN 
Sbjct: 244 LGARNPATCGSIEHKMGIQASATCVMNFDE--------AVGYIVGEPNKGLAAMFTMMNY 295

Query: 300 ARLAVGMQGVAICEAATQKAIEYAKERTQGKAPGW---QGSGMSPIIEHPDIARTLLTMK 356
            RL VG+QG+A  E + Q A+EYA++R Q +AP     +     PII HPD+ R LLTMK
Sbjct: 296 ERLGVGIQGLASAERSYQNAVEYARDRLQSRAPAGPQAKDKAADPIIVHPDVRRMLLTMK 355

Query: 357 ALTQGSRAISFSCAHAIDMAHATEDASQRAHWQERAALLTPIAKSFSTDAGVDVASMGIQ 416
           AL +G RA S   A  +D A  +EDAS R   +E  ALLTP+AK+F TD G++ A  G Q
Sbjct: 356 ALIEGGRAFSTYVAMQLDSAKYSEDASVRKRSEELVALLTPVAKAFLTDLGLECAVHGQQ 415

Query: 417 VHGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLVLRKLPLSEGAQVRGFIAELREI 476
           V GG G+I E G  + +RD RI  IYEGTNGIQA+DL+ RK+  S GA  + F  E+R+ 
Sbjct: 416 VFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGAYYKLFSDEIRQF 475

Query: 477 AARTAASNRDDLGETARYLEASLNDLETTTDWLLSRIKAGETETALAGATAYQRLFGLAL 536
                +    +L E A+ L ASL+ L+  T+W+L + K    E   A +  Y   FG   
Sbjct: 476 ITGAGS----ELDEFAKPLGASLDQLDGLTEWVLQQAKGNPNEIG-AASVEYLHAFGYVA 530

Query: 537 TG---AYLAKGALVSVDDG--RSGHRAALCRFTAENLLAETAALKDRVISGAASL 586
            G   A +A+ AL    D    SG +    RF    LL    +L   V +G+ SL
Sbjct: 531 YGYMWALMARAALAGEGDAPFYSG-KLGTARFYFARLLPRVDSLVASVKAGSESL 584