Pairwise Alignments

Query, 594 a.a., acyl-CoA dehydrogenase from Agrobacterium fabrum C58

Subject, 601 a.a., putative Acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  433 bits (1114), Expect = e-126
 Identities = 224/473 (47%), Positives = 307/473 (64%), Gaps = 14/473 (2%)

Query: 2   YSAPVDDIAFTLKHVAGLEDALSQGVLG--DLSEDLVDAILEEAGRFATGEVAPLADIGD 59
           Y AP+ DI F    + G E A  Q + G  D + D+VDAILEE  +F    ++PL  +GD
Sbjct: 4   YKAPLRDIRFVRDELLGYE-AHYQSLPGCQDATPDMVDAILEEGAKFCEQVLSPLNRVGD 62

Query: 60  RQGAKLADGKVTTPDGWADLYRRWAEAGWNSLTAPEEFGGQNLPHMLNVAALEMWNSGSM 119
           ++G   ++  V TP G+ + Y+++ E GW SL    E GGQ LP  L +A  EM    + 
Sbjct: 63  QEGCTWSESGVKTPTGFKEAYQQFVEGGWPSLAHDVEHGGQGLPESLGLALSEMVGGSNW 122

Query: 120 AFALAPTLTMGAVEAIVTHGSNDLKRIYLPKLVSGEWTGTMNLTEPHAGSDLGVLKTRAE 179
           ++ + P L+ GA+  I  HG+ + +  YL KLVSGEWTGTM LTEPH G+DLG+L+T+AE
Sbjct: 123 SWGMYPGLSHGAMNTISAHGTAEQQHTYLTKLVSGEWTGTMCLTEPHCGTDLGMLRTKAE 182

Query: 180 RNGDGTYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPTGTRGISLFLVPKFLPDENGA 239
              DG+Y++ G KIFI+ GEHD ADNI+H+VLARLPDAP GT+GISLF+VPKFLP+  G 
Sbjct: 183 PQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNAEGG 242

Query: 240 PGSRNDLFCHSLEHKLGIHGSPTCTMIFGDGKFGDEKGALGWLIGEENKGLACMFTMMNN 299
            G RN + C S+EHK+GIHG+ TC M F          A G+LIG  NKGL CMFT MN 
Sbjct: 243 VGERNGVSCGSIEHKMGIHGNATCVMNF--------DAATGYLIGPANKGLNCMFTFMNT 294

Query: 300 ARLAVGMQGVAICEAATQKAIEYAKERTQGKA---PGWQGSGMSPIIEHPDIARTLLTMK 356
           ARL   +QG+A  E A Q  ++YA+ER Q ++   P        PII HPD+ R LLTMK
Sbjct: 295 ARLGTALQGLAHAEVAFQGGLKYARERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTMK 354

Query: 357 ALTQGSRAISFSCAHAIDMAHATEDASQRAHWQERAALLTPIAKSFSTDAGVDVASMGIQ 416
           A  +G+RA+ +  A  +D+   ++D  +R       A LTPIAK+F T+ G + A+ G+Q
Sbjct: 355 AFAEGNRAMVYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEVGFEAANHGVQ 414

Query: 417 VHGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLVLRKLPLSEGAQVRGF 469
           ++GG GFI E G  + +RD+RI+ +YEGT GIQA+DL+ RK+ +++G  ++GF
Sbjct: 415 IYGGHGFIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGF 467