Pairwise Alignments

Query, 606 a.a., DNA mismatch repair protein MutL from Agrobacterium fabrum C58

Subject, 638 a.a., DNA mismatch repair protein from Pseudomonas simiae WCS417

 Score =  431 bits (1108), Expect = e-125
 Identities = 253/625 (40%), Positives = 368/625 (58%), Gaps = 22/625 (3%)

Query: 3   IKQLSETLINQIAAGEVIERPSSATKELVENAIDAGATRIEIATAGGGKGLVRITDNGSG 62
           I+ LS  L NQIAAGEV+ERP+S  KEL+EN+ID+GA RI++    GG  L+R+ D+GSG
Sbjct: 12  IELLSPRLANQIAAGEVVERPASVIKELLENSIDSGAKRIDVDVEQGGVKLLRVRDDGSG 71

Query: 63  MSPADLELAVRRHCTSKISTT--LDDIRTLGFRGEALPSIGSVAKLTITSRQQGAEQGSV 120
           +S  DL LA+ RH TSKI     L+ + +LGFRGEAL SI SVA+LT+TSR + AEQ   
Sbjct: 72  ISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRSAEQAWQ 131

Query: 121 ISVTGGKVSD-VRPAASNAGTIVEVRDLFFATPARLKFLKTERAEAAAITEVVKRMAIAF 179
           +   G  ++  V+PAA   GT VEVRDLFF TPAR KFLK E+ E   + EV+KR+A+A 
Sbjct: 132 VETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALAR 191

Query: 180 PHIRFVLSGTDRSTLEIPSTGDD--HLARMAQILGAEFKDNAIEIDAGREDVTLTGFAGV 237
             + F L    ++ L +    DD     R++ I G  F + A+ I+  R  + L G+ G+
Sbjct: 192 FDVAFHLRHNGKTILSLHEAHDDAARARRVSAICGPGFLEQALPIEIERNGLRLWGWVGL 251

Query: 238 PTFNRGNSSHQYVFVNGRPVQDKLLLSAIRGAYAETVPHGRYPVAVLSITLDPAFVDVNV 297
           PTF+R  +  QY FVNGR V+DKL+  A+R AY + + +GR+P  VL   +DP+ VDVNV
Sbjct: 252 PTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPSVVDVNV 311

Query: 298 HPAKSDVRFRDPGLIRGLIVGAIRQAL--TRDGDRAATTGASQMMNAFRPGYSPSGLRPS 355
           HP K +VRFRD  ++   + G + + L   R  D+ A    + ++    P     G +  
Sbjct: 312 HPTKHEVRFRDGRMVHDFLYGTLHRTLGDVRPDDQLAAPIVTAVVRPSGPQAGEFGPQGE 371

Query: 356 PSATWSAATSP-SRPLAVSGDMQFAEAAQSRF-----SDITMPTARAEPREAYEASQSPS 409
            S   +   SP S+P   + +       Q ++     S + +  A+A  RE +       
Sbjct: 372 MSLAANLLQSPQSQPSYTAPNAGAGSGYQYQYTPRPQSAVPVAEAQAAYREFFAPLPGAE 431

Query: 410 P-EPV--------LYPLGAARAQLHENYIIAQTENGLVIVDQHAAHERLVFEEMRNALHS 460
           P  PV        + PLG A AQL   YI+A+  +GLV+VD HAAHER+++E ++ A+ S
Sbjct: 432 PGAPVALPEGGGDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIAMAS 491

Query: 461 RRPPSQVLLIPEIIDLPEEDCDRLMDHAAGFDALGLVIERFGPGAIAVRETPAMLGEVNV 520
                Q LL+PE + + + + D   +H + F  LG  ++R GP  +A+R+ PA+L +   
Sbjct: 492 EGLSGQPLLVPESLAVSQREADCAEEHHSVFQKLGFELQRLGPETLAIRQIPALLKQAEA 551

Query: 521 QGLVRQLADEIAEWDAASTLANKLEYVAATMACHGSVRSGRRMRPEEMNALLRQMENTPG 580
             LV  +  ++ E+  +  +   +  +  TMACHG++R+ RR+   EMN LLR MENT  
Sbjct: 552 NRLVADVLADLMEYGTSDRIQAHINELLGTMACHGAIRANRRLALPEMNGLLRDMENTER 611

Query: 581 SGQCNHGRPTYIELKLSDIERLFGR 605
           SGQCNHGRPT+ ++ L D+++LF R
Sbjct: 612 SGQCNHGRPTWTQMGLDDLDKLFLR 636