Pairwise Alignments

Query, 239 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 239 a.a., 16S rRNA m3U1498 methyltransferase from Pseudomonas putida KT2440

 Score =  112 bits (281), Expect = 5e-30
 Identities = 84/246 (34%), Positives = 130/246 (52%), Gaps = 17/246 (6%)

Query: 1   MQRLFIEASLSEGVAQEATGEQFNYLANVLRMTDGAEILLFNGRDGEWKAKLSFPSRKKI 60
           + R FI+A LS G   +    Q +Y+  VLRM  G  + LF+G   E++ +L    +K +
Sbjct: 3   LSRFFIDAPLSLG-EHDLPEAQAHYIGRVLRMAPGDAVQLFDGSGQEYRGQLLEVGKKTV 61

Query: 61  SLVPLEQTRPQPDAAELH-YLFAPLKVG-RMDYLVQKAVEMGAGLLQPVMTQH--VQGKI 116
             V L+Q       + LH +L   L  G RMD+ +QKA E+GA  + P++++   V+ K 
Sbjct: 62  R-VSLDQAFAGQADSPLHVHLGQGLSRGERMDWAIQKATELGANEITPIVSERCEVRLKD 120

Query: 117 HNSEKLRAN----AIEAAEQCGILSLPEVAEPVKLKEMLETWPEDRRIIYCDEGDAGQNP 172
             ++K  A+    AI A EQCG  +LP +  PV L E L +   D +++     +     
Sbjct: 121 ERADKRLAHWRQVAISACEQCGRSTLPVIHPPVTLAEWLSSTKADLKLVLHPVAE----- 175

Query: 173 LPILQAVKERKIALLVGPEGGFSEEERALLRSLAFVTPIPLGPRILRADTAAVAALAVIQ 232
            P++   K   +A ++GPEGG SE E    ++  F     LGPR+LR +TA V AL+V Q
Sbjct: 176 -PLISHEKPATLAFVIGPEGGLSEAEVEQAKAAGFHAA-RLGPRVLRTETAPVVALSVAQ 233

Query: 233 AVIGDW 238
            + GD+
Sbjct: 234 QLWGDF 239