Pairwise Alignments

Query, 774 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 557 a.a., 30S ribosomal protein S1 from Acinetobacter radioresistens SK82

 Score = 63.2 bits (152), Expect = 4e-14
 Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 1/94 (1%)

Query: 633 RPSFKTATFADGVDEITDLKPGMLLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVK 692
           R   +  + AD    +  L+ G  + GT+ N+  +GAFVD+G   DGL+H++ +A + +K
Sbjct: 171 RAVMEAESSADREALLAQLEEGQTVTGTIKNLTDYGAFVDLG-GIDGLLHITDMAWKRIK 229

Query: 693 DPHEVVKAGDVVKVRVVEVDVKRKRIGLTMRKDG 726
            P EVV+ G  V V+V++ D +R R+ L +++ G
Sbjct: 230 HPSEVVEVGQEVTVKVLKFDRERNRVSLGLKQLG 263



 Score = 53.5 bits (127), Expect = 3e-11
 Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 3/73 (4%)

Query: 654 GMLLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKD--PHEVVKAGDVVKVRVVEV 711
           G +++  VTN+  +G F +I    +GLVHVS++ D   K+  P +VV+ GD V V V+EV
Sbjct: 277 GSIVKARVTNLTDYGCFAEIAEGVEGLVHVSEM-DHTNKNIHPSKVVQIGDEVDVMVLEV 335

Query: 712 DVKRKRIGLTMRK 724
           D +R+RI L +++
Sbjct: 336 DEERRRISLGIKQ 348



 Score = 41.6 bits (96), Expect = 1e-07
 Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 1/113 (0%)

Query: 617 TVKDIIAELEKPGRDPRPSFKTATFADGVDEITDLKPGMLLEGTVTNVAAFGAFVDIGVH 676
           TV+ +I  ++  G       K        D +   + G L++GTVT V A GA V +   
Sbjct: 414 TVEAVILSVDAEGNRISLGIKQLNSDPFNDFLAANERGALVKGTVTAVDARGATVKLADE 473

Query: 677 QDGLVHVSQLADRFVKDPHEVVKAGDVVKVRVVEVDVKRKRIGLTMR-KDGGE 728
            +  +  S++    V+D  + ++ G  V+ +++ VD K + I L+++ KD  E
Sbjct: 474 VEATLKASEINRDRVEDATKFLEVGQEVEAKIINVDRKSRSINLSIKAKDEAE 526



 Score = 38.9 bits (89), Expect = 7e-07
 Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)

Query: 654 GMLLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLA-DRFVKDPHEVVKAGDVVKVRVVEVD 712
           G  + GT+ ++  FG F+ +    DGLVH+S ++ +   ++     K GD V+  ++ VD
Sbjct: 364 GEKVSGTIKSITDFGIFIGLPGGIDGLVHLSDISWNEQGEEAIRRYKKGDTVEAVILSVD 423

Query: 713 VKRKRIGLTMRK 724
            +  RI L +++
Sbjct: 424 AEGNRISLGIKQ 435



 Score = 30.4 bits (67), Expect = 3e-04
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 5/64 (7%)

Query: 650 DLKPGMLLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEV-VKAGDVVKVRV 708
           +++ G +++G V ++ A    VD G+  +G+V  ++    F+ D  E+ V+ GD V V V
Sbjct: 17  NVEKGAVIQGVVVSIDADWITVDTGLKSEGVVDRAE----FLNDQRELEVQVGDTVDVVV 72

Query: 709 VEVD 712
             +D
Sbjct: 73  EALD 76