Pairwise Alignments

Query, 465 a.a., MFS permease from Agrobacterium fabrum C58

Subject, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

 Score =  141 bits (356), Expect = 4e-38
 Identities = 111/409 (27%), Positives = 204/409 (49%), Gaps = 22/409 (5%)

Query: 9   LAVALFMEQMDSTVIATSLPAIAKDLHVGPITLKLALTAYMVALAIFIPISGWMADKYGA 68
           L++A FM+ +D+T+   +LP I+ +L V        +T++ V+ AI +P++GW++ ++G 
Sbjct: 21  LSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGWLSRRFGE 80

Query: 69  KKIFRIAIGVFVVGSICCAVSSSVFEFVLSRFLQGMGGAMMTPVGRLVLLRTTKRSELVS 128
            K+F  A  +FV+ S  C ++ S+ E V  R LQG+    + P+ + +L+     ++   
Sbjct: 81  VKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVYPPAKRGM 140

Query: 129 AMALLTIPGLVGPLTGPPIGGFITTYFSWHWIFLINVPIGIIGIWLSTIFLPEIET---- 184
           A+ALL +  +V P+ GP +GG+IT  +SW WIF INVP   IG++ + +   ++ T    
Sbjct: 141 ALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVP---IGLFAAAVVRQQMRTRPVV 197

Query: 185 TNPPPMDGKGF--ILSGIAASGVVF--GVSVVSLPALPPAIGIASTVIGFICGFLYMRHA 240
           T+  PMD  G   ++ G+ A  VV   G  +    +    +G   +V+ F+  F+     
Sbjct: 198 TSRQPMDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISVV-FLAVFVIWELT 256

Query: 241 ARHPAPILDFRIFQNATFRAASVGGTVFRISTGAIPFLMPLMLQIGFGLNPFQSGM-ITF 299
            RH  P+++ R+F +  FR  ++           I  ++P  LQ   G     +G+ +  
Sbjct: 257 DRH--PVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAVAP 314

Query: 300 AGAIGAITTKFMAKRVFAATGFRSTLIGAGIVGAFTT-LANSFFTPETPYPLIMIFLVTA 358
            G +  I + F+ K  +A       L G   +   T+    + FT E  +  + +  +  
Sbjct: 315 IGLLPVIMSPFVGK--YAHRFDLRVLAGLAFLAIGTSCYMRAGFTSEVDFQHVALVQLFM 372

Query: 359 GFARSFFFTGSNALSYSDIEDSQASQATSMASVLQQISLALGVAFAASI 407
           G   + FF  + ++  SD+   Q +  + +A+ L+     LG +FAAS+
Sbjct: 373 GIGVALFFMPTLSILLSDLPPHQIADGSGLATFLR----TLGGSFAASL 417