Pairwise Alignments

Query, 1275 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 1145 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  137 bits (345), Expect = 5e-36
 Identities = 103/370 (27%), Positives = 181/370 (48%), Gaps = 24/370 (6%)

Query: 908  EELHSILETATDGVVLLGDDGEIRSLNRSASALFNYDN-GEIAGKPFVTLFAH-----ES 961
            ++  ++ E++ DG +LL   G++ ++N S   L   +   +  G+     F       E 
Sbjct: 789  DQFKNVWESSQDGFMLLNLKGDVLAVNPSMIKLAGMEEYRQFTGRHIKEFFKKPDYYFEH 848

Query: 962  QRAVLDYLSGLANNGVASVLNDGREVIGREASGGF--LPLFMT-IGRLKSSHGYCAVIRD 1018
            +  +L  LS   +  + + +             G+  + LF+T +   K+      V RD
Sbjct: 849  KDLILSLLSKSESGSMEAYM---------PFHSGYKNIELFVTKVNPEKNDDVVLMVFRD 899

Query: 1019 ITQWKRTEEELRNAKRAAETANAHKTDFLARVSHEIRTPLNAIIGFSDMMATERFGPIGN 1078
            +T  K  EE L+ AK  AE AN  KT+FL+ +SHEIRTPLN I+G ++ +  +      N
Sbjct: 900  VTDKKVYEEGLKEAKERAEEANRIKTNFLSNMSHEIRTPLNGILGSTENIIIQN---KDN 956

Query: 1079 PRYVEYANDIGRSGRHVLDIVNDLLDISKIEAGQMDVDFIAVPLNETVAEAVSLVQPQAN 1138
               V     I  SG  +L+ +N +L ++KIEA +M+VD+    +N+ ++  +  ++  A 
Sbjct: 957  HLLVGQLEIIMESGERLLNTINSILSMAKIEANKMEVDYEETNINDFLSHLLIPLKTLAM 1016

Query: 1139 NQRVIIRTALAQSVPQIVADLRSIKQIVLNILSNAIRFTPSGGQIVVSTAYEANGSVSLR 1198
             + +++    A        D R  + IV NI+ NAI+++  G  ++     + +  +   
Sbjct: 1017 KKNLLLTARFATKPFVARVDKRYFEMIVNNIVGNAIKYSDEG--LIKVLLKQVDDKIHFE 1074

Query: 1199 IRDTGIGMTRAELEQAMKPFRQVASSGKRVRGDGTGLGLPLTKAMVDANRANFSITSTPN 1258
            ++D+GIGM+   +++   PF Q  S G   + +GTGLGL +TK +V+       I S  N
Sbjct: 1075 VKDSGIGMSEEFVQKLYAPFEQ-ESVGYDRQFEGTGLGLSITKNLVEILNGTIEIKSKKN 1133

Query: 1259 EGTLVEITFP 1268
             GT V +  P
Sbjct: 1134 AGTTVLVILP 1143