Pairwise Alignments

Query, 302 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

 Score =  316 bits (809), Expect = 5e-91
 Identities = 152/287 (52%), Positives = 203/287 (70%), Gaps = 4/287 (1%)

Query: 14  RWLVVAVPYFWLLLFFAAPFLIIVKISLSDTAISMPPYTPVFEGFSKLGEFFSQLDFENY 73
           R LV+ VP+ WL LFF  PF I++KIS ++  +++PPYT ++       +    L+  NY
Sbjct: 18  RHLVIGVPFIWLFLFFMLPFFIVLKISFAEADVAIPPYTEIYTYVEDKIQLV--LNLANY 75

Query: 74  LFLTEDPLYIEAYLSSLRIAFISTFLLLLIGYPMALAMARAPSSVRPTLVMLVILPFWTS 133
             LTED LY+ AYL SL++AF ST L LLIG+PMA A+A A    +  L++L+++P WT+
Sbjct: 76  GLLTEDELYLSAYLGSLKMAFFSTLLCLLIGFPMAYAIANAKKETQTVLLLLIMMPTWTA 135

Query: 134 FLIRVYAWIGILKPEGLLTVLFQWLGFLGPDQQVNIFRTETAIFIGIVYSYLPFMVLPLY 193
            LIRVYAW+GIL   GLL     W G +  DQ + I  T  A++IG+VYSYLPFM+LPL+
Sbjct: 136 ILIRVYAWMGILSNNGLLNGFLLWTGLI--DQPLQILNTNLAVYIGVVYSYLPFMILPLF 193

Query: 194 SALEKLDNTLLEAAADLGCPPWKAFWKITFPLSLPGVVAGAMICFIPITGEFVIPDLLGG 253
           + L K D +LLEAA+DLG   + +FWKIT PLS  G++AG M+ FIP+ GEFVIP+LLGG
Sbjct: 194 ANLVKHDPSLLEAASDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPELLGG 253

Query: 254 AQTLMIGKTLWTEFFGNRDWPLASAVAVLLLILLVVPIAIFQNQQKK 300
            +TLMIGK LW EFF NRDWP+ASA+AV++L +L+VPI +F   Q K
Sbjct: 254 PETLMIGKVLWQEFFNNRDWPVASALAVVMLAILIVPILLFNRSQAK 300