Pairwise Alignments

Query, 365 a.a., ABC transporter, substrate binding protein (putrescine) from Agrobacterium fabrum C58

Subject, 367 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  367 bits (942), Expect = e-106
 Identities = 180/365 (49%), Positives = 247/365 (67%), Gaps = 3/365 (0%)

Query: 4   RSLRLTLALTTALVAAGS--AMAQEKVVHVYNWSDYIDPVILEDFTKETGIKVVYDVYDG 61
           R  RL      A + AG+  A A+++ + VYNW DYI P  L  F K++G+K+VYD++D 
Sbjct: 3   RLKRLLAPFIAATLFAGALHAQAEQRTLRVYNWFDYITPQTLTAFQKDSGVKLVYDIFDT 62

Query: 62  NEVLETKLLAGSSGYDVVAPTSPFLARQIKAGVYQKLDKSKLPNLKNAWPDITERLAKYD 121
           NE LE KLL G+SGYDVV P++ FLA+QI+AGV+Q LD+SKLPN ++  P + + +   D
Sbjct: 63  NEALEAKLLTGNSGYDVVVPSNVFLAKQIEAGVFQPLDRSKLPNWQHLDPALMKLIEAND 122

Query: 122 PGNEYAVNYMWGTTGIGYNVAKVKAALGD-VPVDSWDVLFKPENAEKLKSCGINILDASD 180
           PGN++AV YM+GT  IG+N AKVKAALGD  PVDSWD++FK EN  KLK CG+ +LD+  
Sbjct: 123 PGNKFAVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLIFKEENIAKLKQCGVALLDSPS 182

Query: 181 ETFAIAMNYLGKNPDSKETADLEAGGEVYSKIRPYVKTFNSSPYINDLANGDTCISIGWS 240
           E   +A+ YLG  P+S + AD +   E+  KIRP++  F+SS Y+ D+ANGD C+++G+S
Sbjct: 183 EILPLALQYLGLPPNSDKPADYKKAEELMLKIRPHITYFHSSKYMADIANGDICVAVGYS 242

Query: 241 GDILQAKTRAEEAKNGVEVNYVIPKEGTYIWMDSFAIPADAKNVDEAHAFINYMMKPEVA 300
           G   QA  RA EA NGV V+  +PKEG  IW D  AIP  A N ++AH FINY+++PEV 
Sbjct: 243 GSFSQAANRAREANNGVVVDMRLPKEGAPIWFDMLAIPKGAANPEDAHTFINYLLRPEVI 302

Query: 301 AKASDYVQYANGNLPSQALMDPSVAKNPGVYPDPETMKKLFTISPYGPKEQRVLNRVWTQ 360
           A  SD+V Y N N  +   ++P++  NP +YP  E M KL+T+ P     +R   R WT+
Sbjct: 303 APISDFVGYPNPNKDATDKVNPTIRNNPNLYPTAEAMAKLYTLKPLTRNAERARTRAWTR 362

Query: 361 IKTGT 365
           IK+GT
Sbjct: 363 IKSGT 367