Pairwise Alignments

Query, 365 a.a., ABC transporter, substrate binding protein (putrescine) from Agrobacterium fabrum C58

Subject, 365 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

 Score =  369 bits (948), Expect = e-107
 Identities = 180/363 (49%), Positives = 252/363 (69%), Gaps = 1/363 (0%)

Query: 3   NRSLRLTLALTTALVAAGSAMAQEKVVHVYNWSDYIDPVILEDFTKETGIKVVYDVYDGN 62
           N+  +  LA       A +  A++KV++VYNWSDYI P  +  F K+TGIKV YDV+D N
Sbjct: 2   NKMGKTLLAAALMGAMASAVQAEDKVLNVYNWSDYIAPDTIAKFEKQTGIKVKYDVFDSN 61

Query: 63  EVLETKLLAGSSGYDVVAPTSPFLARQIKAGVYQKLDKSKLPNLKNAWPDITERLAKY-D 121
           E LE KLLAG SGYD+V P++ FLA+QIKAGVY++LD+SKLPN KN  PD+ + +    D
Sbjct: 62  ETLEAKLLAGKSGYDIVVPSNNFLAKQIKAGVYEELDRSKLPNWKNLDPDLLKAVGDASD 121

Query: 122 PGNEYAVNYMWGTTGIGYNVAKVKAALGDVPVDSWDVLFKPENAEKLKSCGINILDASDE 181
             N++A  YMWG+ GIGYN  KVKAALG   +DSWDV+FKPEN  KLKSCG++ LDA  E
Sbjct: 122 KDNKHAFPYMWGSIGIGYNPEKVKAALGVDKIDSWDVVFKPENIAKLKSCGVSFLDAPTE 181

Query: 182 TFAIAMNYLGKNPDSKETADLEAGGEVYSKIRPYVKTFNSSPYINDLANGDTCISIGWSG 241
               A++YLGK  DS +  DL+A  +++ KIRP +  F+SS YI D+ANG+ C+++G+SG
Sbjct: 182 MLPAALHYLGKPTDSTKKEDLKAAEDLFLKIRPSITYFHSSKYIGDMANGNICVAVGYSG 241

Query: 242 DILQAKTRAEEAKNGVEVNYVIPKEGTYIWMDSFAIPADAKNVDEAHAFINYMMKPEVAA 301
           D+ Q+K RA EA + V+V+YVIPKEG   + D  AIP DA++ D A+ F+N++M+PE+ A
Sbjct: 242 DLEQSKARAHEAGDKVKVDYVIPKEGAGTFYDMVAIPKDAEHKDAAYEFMNFLMQPEIMA 301

Query: 302 KASDYVQYANGNLPSQALMDPSVAKNPGVYPDPETMKKLFTISPYGPKEQRVLNRVWTQI 361
           + ++ V++ NGN  +   +D  +  +P +YP  E  K+L+ I+      QRV+ R WT+I
Sbjct: 302 EITNAVRFPNGNAAATPFVDKDITSDPSIYPPAEVKKQLYAIAAPDASVQRVITRSWTKI 361

Query: 362 KTG 364
           K+G
Sbjct: 362 KSG 364