Pairwise Alignments

Query, 365 a.a., ABC transporter, substrate binding protein (putrescine) from Agrobacterium fabrum C58

Subject, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  371 bits (952), Expect = e-107
 Identities = 185/360 (51%), Positives = 243/360 (67%), Gaps = 1/360 (0%)

Query: 4   RSLRLTLALTTALVAAGSAMAQEKVVHVYNWSDYIDPVILEDFTKETGIKVVYDVYDGNE 63
           R L+  +     L+ A +  A    V VYNW+DYI    L DF   +GIKVVYDV+D NE
Sbjct: 2   RHLQALIPAAFTLLFATTTQAAP-TVSVYNWTDYIGDTTLADFQASSGIKVVYDVFDSNE 60

Query: 64  VLETKLLAGSSGYDVVAPTSPFLARQIKAGVYQKLDKSKLPNLKNAWPDITERLAKYDPG 123
            LE KLLAG +GYDVV P++ FLARQ +AG +  LD+SKLPN ++  P + ++L + DPG
Sbjct: 61  TLEGKLLAGRTGYDVVVPSNHFLARQAQAGAFLPLDRSKLPNWQHLDPKLLKQLEQNDPG 120

Query: 124 NEYAVNYMWGTTGIGYNVAKVKAALGDVPVDSWDVLFKPENAEKLKSCGINILDASDETF 183
           N+YAV Y+WGT GIGYNV KVKAALG   +DSW VLF+PEN +KLK CG+  +D+ DE F
Sbjct: 121 NQYAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSPDELF 180

Query: 184 AIAMNYLGKNPDSKETADLEAGGEVYSKIRPYVKTFNSSPYINDLANGDTCISIGWSGDI 243
              +NYLG +P S++  D         ++RPY+  F+SS Y++DLANGD CI+ G+SGD+
Sbjct: 181 PAVLNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCIAFGYSGDV 240

Query: 244 LQAKTRAEEAKNGVEVNYVIPKEGTYIWMDSFAIPADAKNVDEAHAFINYMMKPEVAAKA 303
            QA  RA EAKNGV+V Y IPKEG+ +W D  AIP DA N ++A AFINY++ P+V AK 
Sbjct: 241 FQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKVIAKV 300

Query: 304 SDYVQYANGNLPSQALMDPSVAKNPGVYPDPETMKKLFTISPYGPKEQRVLNRVWTQIKT 363
           S  V YAN N  ++A MD S+  NP +YP  E + KL+  S   PK  RV+ R W++IK+
Sbjct: 301 SATVGYANANPDAKAYMDASLVNNPEIYPPQEVLDKLYISSTPSPKIMRVMTRSWSKIKS 360