Pairwise Alignments

Query, 365 a.a., ABC transporter, substrate binding protein (putrescine) from Agrobacterium fabrum C58

Subject, 362 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  308 bits (788), Expect = 2e-88
 Identities = 157/359 (43%), Positives = 223/359 (62%), Gaps = 1/359 (0%)

Query: 5   SLRLTLALTTALVAAGSAMAQEKVVHVYNWSDYIDPVILEDFTKETGIKVVYDVYDGNEV 64
           ++R +L L + LV A    A+EKVV++Y+W+DY+ P  L+ F +ETG KV YD +D  EV
Sbjct: 3   AMRRSLCLLS-LVLALPLQAEEKVVNLYSWADYVAPQTLQRFEQETGYKVRYDTFDTPEV 61

Query: 65  LETKLLAGSSGYDVVAPTSPFLARQIKAGVYQKLDKSKLPNLKNAWPDITERLAKYDPGN 124
           LETKLL G SGYDVV P+S  LAR +KA   Q LD   +P   N   D+  +LA+ DPGN
Sbjct: 62  LETKLLTGGSGYDVVVPSSTVLARALKAHALQPLDAQAMPGYGNLDKDLLGKLAEVDPGN 121

Query: 125 EYAVNYMWGTTGIGYNVAKVKAALGDVPVDSWDVLFKPENAEKLKSCGINILDASDETFA 184
            +AV Y WGT G+G NV  V+  LGDVP+DS D+LFKPE A +LK CGI + D+  E   
Sbjct: 122 RHAVPYTWGTLGLGVNVEAVRQRLGDVPLDSLDLLFKPEYATRLKGCGIALPDSPQEVIG 181

Query: 185 IAMNYLGKNPDSKETADLEAGGEVYSKIRPYVKTFNSSPYINDLANGDTCISIGWSGDIL 244
           +A+NYLGK+P S+   DL A   + S+++P +    +   INDLANG  C+++ ++GD  
Sbjct: 182 VALNYLGKDPYSQNKDDLAAAQNLLSQLQPSISYVANGRQINDLANGSVCLALTYNGDAA 241

Query: 245 QAKTRAEEAKNGVEVNYVIPKEGTYIWMDSFAIPADAKNVDEAHAFINYMMKPEVAAKAS 304
            A  +A  A    EV Y IP+EGT +W D+  IP DA + + A AFI +M+KPE  A  +
Sbjct: 242 MAADQARRAGKPFEVIYRIPREGTLVWQDNLVIPKDAPHPEAARAFIAFMLKPESVAALT 301

Query: 305 DYVQYANGNLPSQALMDPSVAKNPGVYPDPETMKKLFTISPYGPKEQRVLNRVWTQIKT 363
           + + +AN N  +  L+D +V  +P +YP  E  ++L+        + R  NR+WT  ++
Sbjct: 302 NTLFFANANQAATPLVDEAVRNDPDIYPSAEVRQRLYADRSMALADLRQRNRLWTAFRS 360