Pairwise Alignments

Query, 365 a.a., ABC transporter, substrate binding protein (putrescine) from Agrobacterium fabrum C58

Subject, 359 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  365 bits (937), Expect = e-105
 Identities = 177/357 (49%), Positives = 239/357 (66%), Gaps = 2/357 (0%)

Query: 9   TLALTTALVAAGSAMAQEKVVHVYNWSDYIDPVILEDFTKETGIKVVYDVYDGNEVLETK 68
           T  L   ++AA  A A E  V +YNWS Y+ P  L++F + +GI   YDVYD NE L+ K
Sbjct: 3   TFLLAPLMLAASVASAAE-TVKIYNWSSYVAPDTLKNFQQASGIVPTYDVYDSNETLDGK 61

Query: 69  LLAGSSGYDVVAPTSPFLARQIKAGVYQKLDKSKLPNLKNAWPDITERLAKYDPGNEYAV 128
           L+ G+SGYDVV P++ F+ARQI+    ++LDKSKLPN  N  P + + L   DPGN+Y  
Sbjct: 62  LMTGNSGYDVVFPSNHFMARQIQGKALKRLDKSKLPNWHNLNPVLLKALEVNDPGNQYGF 121

Query: 129 NYMWGTTGIGYNVAKVKAALGD-VPVDSWDVLFKPENAEKLKSCGINILDASDETFAIAM 187
            Y+WG+TGIGYN+ KVKA LGD  PVDSWD++FKPE   KLKSCG+ +LD   E   IA+
Sbjct: 122 PYLWGSTGIGYNIDKVKAVLGDNAPVDSWDLIFKPEYMSKLKSCGVAVLDNGPELLPIAL 181

Query: 188 NYLGKNPDSKETADLEAGGEVYSKIRPYVKTFNSSPYINDLANGDTCISIGWSGDILQAK 247
           +YLG    S++  D E   ++  K+RPY+  F+SS Y  DLANGD C+ +G+SGD+LQAK
Sbjct: 182 HYLGLPHHSQDPKDYEKAKDLLMKVRPYISYFHSSKYTGDLANGDICVVVGFSGDVLQAK 241

Query: 248 TRAEEAKNGVEVNYVIPKEGTYIWMDSFAIPADAKNVDEAHAFINYMMKPEVAAKASDYV 307
            RA+EA NGV+V Y IPKEG  +W D  A+P DA +    +A++NY+++PEV A  S++V
Sbjct: 242 NRADEANNGVKVGYSIPKEGAPMWFDMVAMPVDAPDEKAGYAYMNYLLQPEVMANISNHV 301

Query: 308 QYANGNLPSQALMDPSVAKNPGVYPDPETMKKLFTISPYGPKEQRVLNRVWTQIKTG 364
           QYANGNL +  L+DP++  N  +YP  E M KL+ +     K  R+  R+WT IK G
Sbjct: 302 QYANGNLKADGLVDPAMKGNTMIYPSDEVMGKLYALEAMPAKIDRIRTRIWTSIKAG 358