Pairwise Alignments

Query, 362 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 360 a.a., ABC-type sugar transport systems, ATPase components from Enterobacter asburiae PDN3

 Score =  325 bits (834), Expect = 9e-94
 Identities = 188/363 (51%), Positives = 233/363 (64%), Gaps = 18/363 (4%)

Query: 1   MTSLVLKDIRKSY-GQVKVLHGIDLQIEQGEFIVFVGPSGCGKSTLLRMIAGLEEITGGE 59
           M  L LK I+K Y  QV V+    L+IE  EFIVFVGPSGCGKST LRMIAGLEEI+ GE
Sbjct: 1   MAQLSLKHIQKIYDNQVHVVKDFSLEIEDKEFIVFVGPSGCGKSTTLRMIAGLEEISAGE 60

Query: 60  MFIDGQLVNEIPPSRRGIAMVFQSYALYPHMTVYDNMAFGMKIAKENKQEIDRRVRAAAE 119
           + IDG  +N++P   R IAMVFQ+YALYPHMTVYDNMAFG+K+ K     I+ RV  AA+
Sbjct: 61  LIIDGVCMNDVPAKSRDIAMVFQNYALYPHMTVYDNMAFGLKMQKIAPAVIEERVNWAAQ 120

Query: 120 ILQLTQYLERLPKALSGGQRQRVAIGRAICRNPKVFLFDEPLSNLDAALRVATRIEIAKL 179
           IL L +YL+R P ALSGGQRQRVA+GRAI R   VFL DEPLSNLDA LRV  R EI+KL
Sbjct: 121 ILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFLMDEPLSNLDAKLRVQMRAEISKL 180

Query: 180 NEQMADTTMIYVTHDQVEAMTLADRIVVLNAGRVEQVGPPLELYERPANLFVAKFIGSPA 239
           ++++ +TTMIYVTHDQ EAMT+A RIV+L  G ++QVG P ++Y  PAN+FVA FIGSPA
Sbjct: 181 HQKL-NTTMIYVTHDQTEAMTMATRIVILKDGIIQQVGAPKQVYNEPANMFVAGFIGSPA 239

Query: 240 MNIIAAKIVGTGERTSIELAGGKTLAVDVP-------TPATEQGKAASFGVRPEDLSIVT 292
           MN I   I    +R  +     +TL + +P         A  Q KA  FG+RPED+  + 
Sbjct: 240 MNFIRGAI---DDRYFVT----ETLRLAIPEDKLASLNAAGYQRKAVVFGIRPEDILTLQ 292

Query: 293 GDDYLFEGKVAIVEALGEVTLLYLEAPKGQEPIIVKVPGIVSVGKGETLRFAAPQEKLHL 352
                   KV++ E  G   +LY  A  G   ++V+         G+ +       K H 
Sbjct: 293 SRGENIAAKVSVAELTGAEFMLY--ATVGGHELVVRAGAANDYAAGDNIDIQFDMNKCHF 350

Query: 353 FDA 355
           FDA
Sbjct: 351 FDA 353



 Score = 25.0 bits (53), Expect = 0.003
 Identities = 11/19 (57%), Positives = 14/19 (73%)

Query: 339 ETLRFAAPQEKLHLFDAAG 357
           ETLR A P++KL   +AAG
Sbjct: 255 ETLRLAIPEDKLASLNAAG 273