Pairwise Alignments

Query, 386 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 349 a.a., carbohydrate ABC transporter permease from Dickeya dadantii 3937

 Score =  133 bits (335), Expect = 7e-36
 Identities = 75/228 (32%), Positives = 123/228 (53%), Gaps = 10/228 (4%)

Query: 158 DNYRTVLTSEGIGQSFVNSLTVAVPATVIPILIAAFAAYALSWMNFSGRNLLIAMVVGLI 217
           DNY T ++         N++ V V AT++ +L+++ AA+AL+   F GR  ++ + +  +
Sbjct: 131 DNYTTPMSKFHFATYLKNTVFVTVMATLLTLLLSSMAAFALAKYEFRGRGTVLTLFLSTM 190

Query: 218 VVPLQMSLIPLLRLYNEIGTIFGVPSKTYAGIW-LAHTAFGLPLAIYLLRNYISGLPKEI 276
           ++PL + ++P   +   IG   G        +W +       P  ++LLR Y+  +P E+
Sbjct: 191 MIPLSVVMVPTFLVV--IGLRMG------DNLWGVIIPTIATPTGVFLLRQYMLTIPDEL 242

Query: 277 IESARVDGASDFEIFVKIILPLSFPALASFAIFQFLWTWNDLLVAMVFLGTQKDELVLTG 336
           IE+AR+D AS+F I+ KIILPL+ PALA  AIF  +W WND L  ++ L +Q D   L  
Sbjct: 243 IEAARIDAASEFRIYWKIILPLTAPALAVLAIFSVIWRWNDFLWPLIVLSSQ-DNFTLQI 301

Query: 337 ALNALLGSRGGNWEILTASAFVTIIVPLGVFFALQRYLVRGLLAGSVK 384
            LNA  G     W  + A   ++++    VF  LQ+Y+  G+    +K
Sbjct: 302 GLNAFQGQFSVQWHYILAMTMLSLLPVTAVFVFLQKYITTGIANTGMK 349