Pairwise Alignments

Query, 386 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 259 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  134 bits (337), Expect = 3e-36
 Identities = 78/230 (33%), Positives = 121/230 (52%), Gaps = 14/230 (6%)

Query: 158 DNYRTVLTSEGIGQSFVNSLTVAVPATVIPILIAAFAAYALSWMNFSGRNLLIAMVVGLI 217
           +N+   LT         NS+ V   ATV+ +++ A AA+ALS   F G   +  +++  +
Sbjct: 41  ENFTDPLTQFSFLTFLKNSVFVTFVATVLTLIVNAMAAFALSKYRFRGEKAIFVLIISTL 100

Query: 218 VVPLQMSLIPLLRLYNEIGTI---FGVPSKTYAGIWLAHTAFGLPLAIYLLRNYISGLPK 274
           ++PL + ++P   +   +G +   +GV   T A           P  ++LLR Y+  +P 
Sbjct: 101 MIPLTVVMVPAYLVIVGVGLVDNLWGVIIPTVA----------TPTGVFLLRQYMLTIPD 150

Query: 275 EIIESARVDGASDFEIFVKIILPLSFPALASFAIFQFLWTWNDLLVAMVFLGTQKDELVL 334
           E+IE+ARVD AS+F IF +IILPL+ PALA  AIF  LW WND L  ++ L + ++   L
Sbjct: 151 ELIEAARVDAASEFRIFWRIILPLTAPALAVLAIFSVLWRWNDFLWPLIVL-SSRENFTL 209

Query: 335 TGALNALLGSRGGNWEILTASAFVTIIVPLGVFFALQRYLVRGLLAGSVK 384
              LNA  G     W  + A  F+++     VF  LQRY+  G+    +K
Sbjct: 210 QVGLNAFQGEFSVQWHYILAMTFLSLAPVTVVFLFLQRYITTGIAGTGMK 259