Pairwise Alignments

Query, 695 a.a., flagellar biosynthesis protein from Agrobacterium fabrum C58

Subject, 692 a.a., flagellar biosynthesis protein A (NCBI) from Escherichia coli BW25113

 Score =  443 bits (1139), Expect = e-128
 Identities = 253/679 (37%), Positives = 410/679 (60%), Gaps = 26/679 (3%)

Query: 25  IISILCVLFLPIPVMLVDIGLAFSIALSVLILMVALWIQRPLDFSSFPTVLLIATMIRLS 84
           I+ IL ++ LP+P  ++D+   F+IALS+++L+VA++ QR L+F++FPT+LL  T++RL+
Sbjct: 28  ILLILSMMVLPLPAFILDLLFTFNIALSIMVLLVAMFTQRTLEFAAFPTILLFTTLLRLA 87

Query: 85  LNIATTRVILSHGNEGPTAAGGVIAGFSSLVMSGDFVIGLIVFLILITVNFIVITKGATR 144
           LN+A+TR+IL  G+ G  AAG V+  F   ++ G+F IG++VF+IL+ +NF+VITKGA R
Sbjct: 88  LNVASTRIILMEGHTGAAAAGKVVEAFGHFLVGGNFAIGIVVFVILVIINFMVITKGAGR 147

Query: 145 IAEVGARFTLDAIPGKQMSIDADLSAGIIDEKEAQRRRRELEEESSFFGSMDGASKFVRG 204
           IAEVGARF LD +PGKQM+IDADL+AG+I E EA++RR E+ +E+ F+GSMDGASKFVRG
Sbjct: 148 IAEVGARFVLDGMPGKQMAIDADLNAGLIGEDEAKKRRSEVTQEADFYGSMDGASKFVRG 207

Query: 205 DAIAGLIITAINVFGGIIIGYFRHGMPIGEAADVFVKLSVGDGIVSQIPALIVSLAAGLL 264
           DAIAG++I  IN+ GG+++G  +HGM +G AA+ +  L++GDG+V+QIPAL++S AAG++
Sbjct: 208 DAIAGILIMVINIVGGLLVGVLQHGMSMGHAAESYTLLTIGDGLVAQIPALVISTAAGVI 267

Query: 265 VSRGGTAGSTDQAVINQLSGYPRALMVSAMLMGLLAVIPGLPFVPF-IFLGGIMAFGSWY 323
           V+R  T     + ++NQL   P  +++SA ++GLL ++PG+P + F +F  G++    W 
Sbjct: 268 VTRVSTDQDVGEQMVNQLFSNPSVMLLSAAVLGLLGLVPGMPNLVFLLFTAGLLGLAWWI 327

Query: 324 IPRQ--AEAESALRRQEEENKVLQTTEAEKDSVKQVLKTAEIELALGKQVSTRLL----- 376
             R+  A AE    +  E N V++ T              ++E +LG +V  RL+     
Sbjct: 328 RGREQKAPAEPKPVKMAENNTVVEAT----------WNDVQLEDSLGMEVGYRLIPMVDF 377

Query: 377 GAHQELAFRVGKMRKKFATQYGFVVPEIKVSDDIMIPEKAYQIRVHGTTIASSNLRVGDV 436
               EL  R+  +RKKFA + GF+ P + + D++ +    Y+I + G  I S +   G  
Sbjct: 378 QQDGELLGRIRSIRKKFAQEMGFLPPVVHIRDNMDLQPARYRILMKGVEIGSGDAYPGRW 437

Query: 437 LVVTGAGRKPSIPGDEIREPAFGMPAVSILETFTEDLKREGFHPIDNVSVVLTHLSEVIR 496
           L +       ++PG+   +PAFG+ A+ I     E  + +G+  ++  +VV THL+ +I 
Sbjct: 438 LAINPGTAAGTLPGEATVDPAFGLNAIWIESALKEQAQIQGYTVVEASTVVATHLNHLIS 497

Query: 497 NNLPQLLSYKDVKILIDRLDPEYKKLADEICSSHMSYSGLQAVLKLLLAERVSIRNLHLI 556
            +  +L   ++ + L+DR+  E  KL +++    ++ + L  VL+ LL E+V IR++  I
Sbjct: 498 QHAAELFGRQEAQQLLDRVAQEMPKLTEDLVPGVVTLTTLHKVLQNLLDEKVPIRDMRTI 557

Query: 557 LEAVAELAPHVRKTEQIVEHVRVRMSQQLCGD-LADNGVLRVLRLGNKWDMVFHQALKRD 615
           LE +AE AP      ++   VRV + + +          + V+ L    + +  QAL   
Sbjct: 558 LETLAEHAPIQSDPHELTAVVRVALGRAITQQWFPGKDEVHVIGLDTPLERLLLQAL--- 614

Query: 616 QKGEIVEFDIDPRHLEEFSEQASKVIREFMDRGLPFVLVTSPETRSYVRMIIERLFATLP 675
           Q G  +E  +  R L +  E  S+  +E +  G P VL+ +   R  +   + R    L 
Sbjct: 615 QGGGGLEPGLADRLLAQTQEALSR--QEML--GAPPVLLVNHALRPLLSRFLRRSLPQLV 670

Query: 676 VLSHVELAKGLEIKILGAI 694
           VLS++EL+    I++   I
Sbjct: 671 VLSNLELSDNRHIRMTATI 689