Pairwise Alignments

Query, 433 a.a., flagellar motor protein, PAL/OmpA family from Agrobacterium fabrum C58

Subject, 285 a.a., flagellar motor protein from Pseudomonas putida KT2440

 Score = 42.7 bits (99), Expect = 1e-08
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 13/84 (15%)

Query: 18 KRHKGGHDGAHGGAWKIAYADFMTAMMAFFLVMWLVNAANE----ETKASVASYFN---- 69
          +RH   H+      W ++YADF+T + AFF+VM+ +++ NE        ++   FN    
Sbjct: 4  RRHTEEHENHE--RWLVSYADFITLLFAFFVVMYSISSINEGKYKVISQALLGVFNDPER 61

Query: 70 ---PIKLSDEKPSSKGLEKPADKE 90
             PI + DE+P S    +P  K+
Sbjct: 62 SMKPIPIGDEQPLSVRPAEPLVKD 85



 Score = 41.6 bits (96), Expect = 3e-08
 Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 6/107 (5%)

Query: 326 MFNIGSAVPRGELVLAMEKIGKLLQERGGSVVIRGHTDGRQFK-GEANDNWRLSMDRAHS 384
           +F  G A+P  +    +EK+  +L+     V + G TD    +  +   NW LS  RA S
Sbjct: 139 LFGSGDAMPSDKAFAIIEKVASILKPFANPVHVEGFTDNLPIRTAQYPTNWELSSARAAS 198

Query: 385 AYYMLVRGGLSEERVKQVSGFADRRLQVPSNPLADA---NRRIEILL 428
              +L   G++  R+  V G+ + +  V SN  A+    NRR+ +++
Sbjct: 199 IVRLLAMEGVNPARMASV-GYGEYQ-PVASNDTAEGRARNRRVVLVI 243