Pairwise Alignments

Query, 319 a.a., flagellar motor switch protein from Agrobacterium fabrum C58

Subject, 311 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 57.4 bits (137), Expect = 4e-13
 Identities = 54/258 (20%), Positives = 109/258 (42%), Gaps = 15/258 (5%)

Query: 67  ESGLMTDLIANVGQNVAVADC-SLRNWCPNFMMAVGNGFVIALMERMLGASPDSIGDPDE 125
           ESG + D++    + +A+A   +  +W    ++     F+  ++E + GA        DE
Sbjct: 61  ESGRIGDVL-EAYEGMAIAGIFNAPSWDSQLIVGFDRDFIFTMIEVLFGADGSEPPVEDE 119

Query: 126 RNLSHIELDLAAMVLGRIAGVLRSGVNAPGGFEATIDPPFN-ANGKSAFDEMIAGL---Y 181
           R+ S+IE  +A ++  ++   L+S       F    D  F     ++  D  + G     
Sbjct: 120 RSFSNIEGRVAQLLFEQMTKALKSA------FALVSDTTFQFERQETRMDFAVIGRRNNL 173

Query: 182 GVTIRMKIDIGKVSSEFSLIVPQRPLLKTS-IVAPKASAQALKKQEEWMDMISQQVKRSQ 240
            VT +  +       E  + +PQ  L      +A  + A+   +  +W   I  +V R++
Sbjct: 174 AVTAKFLLQALNRGGEMFVTIPQSALTPLRRALASTSQAETGGRDPKWAQKIRDEVNRTE 233

Query: 241 VTLEARIKLETLTLRTISRLVAGDVIPFQDLKQDDIGVEVSANGSKLYNCEFGKSGDRYM 300
           V L A +    +TL  I+ L  G ++         + +E +A    L+ C  G+S   Y+
Sbjct: 234 VELRAVLDEHEVTLGDIAALKVGQILKLDATPASRVKLESAAQ--PLFWCHLGQSDGGYV 291

Query: 301 VRVKNNVSTDDEILRHLM 318
           VR+   ++   + +  ++
Sbjct: 292 VRLDEQINQHQDFIDDIL 309