Pairwise Alignments

Query, 290 a.a., flagellar motor protein from Agrobacterium fabrum C58

Subject, 283 a.a., Flagellar motor rotation protein from Pseudomonas putida KT2440

 Score =  209 bits (532), Expect = 6e-59
 Identities = 108/280 (38%), Positives = 167/280 (59%), Gaps = 10/280 (3%)

Query: 4   VIGLIITFGCIIGGYMAMGGHLNVLVQPFELMIIGGAGLGGFIMANP----MKVVKDSGK 59
           +IG+I+ F  ++GGY+   G +  L+QPFE++IIGGA  G F+ ANP    M V+K S K
Sbjct: 4   IIGIIVVFASVLGGYVLSHGKIAALIQPFEVLIIGGAAFGAFLQANPGHMTMHVIKKSMK 63

Query: 60  ALGEAFKHSVPKERNYLDVLGVLYSLMRDLRTKSRNEIEAHIDNPEESSIFQSAPSVLKN 119
             G  F H+      YL+VLG++Y ++   R +    IEA I++   S IF   P+VL +
Sbjct: 64  MFGSRFSHAF-----YLEVLGLVYEILNKSRREGMMAIEADIEDAAASPIFAKYPTVLAD 118

Query: 120 KELTSFICDYVRLIIIGNARSHEIEALMDEEIETILHDKLKPYHAITTMGDSFPAIGIVA 179
           + +T+F+CDY+R++  GN   HE+E L D E+ ++  +   P HA+T + D  P  GIVA
Sbjct: 119 ERMTAFVCDYLRIMSTGNMAPHELEGLFDMELLSMKEELEHPSHAVTGIADGMPGFGIVA 178

Query: 180 AVLGVIKAMGKINESPEVLGGL-IGAALVGTMLGIILSYSICNPLASQVKIVRTKQHRLY 238
           AVLG++  M  + +  +   G+ +GAALVGT  GI+ +Y    PLA  ++    ++  LY
Sbjct: 179 AVLGIVVTMASLGDGDQAAIGMHVGAALVGTFFGILAAYGFFGPLAKCLEHDAKEELNLY 238

Query: 239 IIVKQTLIAYMNGSVPQVALEYGRKTISNYERPSIDAVEQ 278
             +K +L+A  +G  P +A+E+GRK +    RPS   +EQ
Sbjct: 239 ESIKASLVASASGMPPSLAVEFGRKVLYPKHRPSFAELEQ 278