Pairwise Alignments

Query, 290 a.a., flagellar motor protein from Agrobacterium fabrum C58

Subject, 246 a.a., flagellar motor rotation protein from Pseudomonas putida KT2440

 Score = 71.2 bits (173), Expect = 2e-17
 Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 32/257 (12%)

Query: 4   VIGLIITFGCIIGGYMAMGGHLNVLVQ-PFELMIIGGAGLGGFIMANPMKVVKDSGKALG 62
           +IGLI+ F  I+GG    GGH+  LV  P  L+++GG  L   ++ +P+           
Sbjct: 6   LIGLILAFVAIVGGNFLEGGHVGALVNGPAALIVLGGT-LAAALLQSPLT---------- 54

Query: 63  EAFKHSVPKERNYLDVLGVLYSLMRDLRTKSRNEIEAHIDNPEESSIFQSAPSVLKNKEL 122
            +FK ++               ++R +    R ++   ID     S+      +L  + +
Sbjct: 55  -SFKRAL--------------QILRWILFPPRVDLAGGIDRVVNWSLTARKEGLLGLEGV 99

Query: 123 TSFICD-YVRL---IIIGNARSHEIEALMDEEIETILHDKLKPYHAITTMGDSFPAIGIV 178
                D Y R    +++  A    I ++++ ++ T     ++      +MG   P IGI+
Sbjct: 100 ADSEPDPYARKGLQLLVDGAEPEAIRSILEVDLLTQEGRDIQAAKVFESMGGYAPTIGII 159

Query: 179 AAVLGVIKAMGKINESPEVLGGLIGAALVGTMLGIILSYSICNPLASQVKIVRTKQHRLY 238
            AV+G+I  MG + + P  LG  I  A V T+ G+  +  +  P+AS++K +  +Q R  
Sbjct: 160 GAVMGLIHVMGNLAD-PSQLGNGIAVAFVATIYGVASANLVLLPVASKLKAIVMRQSRYR 218

Query: 239 IIVKQTLIAYMNGSVPQ 255
            ++ + L++   G  P+
Sbjct: 219 EMLLEGLLSIAEGENPR 235