Pairwise Alignments

Query, 290 a.a., flagellar motor protein from Agrobacterium fabrum C58

Subject, 295 a.a., Flagellar motor rotation protein MotA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  233 bits (593), Expect = 5e-66
 Identities = 121/278 (43%), Positives = 177/278 (63%)

Query: 3   IVIGLIITFGCIIGGYMAMGGHLNVLVQPFELMIIGGAGLGGFIMANPMKVVKDSGKALG 62
           I++G ++  G + GGY+  GGHL  L QP EL+IIGGAG+G FI+ N  K +K + KA+ 
Sbjct: 3   ILLGYLVVIGTVFGGYVMTGGHLGALYQPAELVIIGGAGIGAFIVGNNGKAIKGTMKAIP 62

Query: 63  EAFKHSVPKERNYLDVLGVLYSLMRDLRTKSRNEIEAHIDNPEESSIFQSAPSVLKNKEL 122
             F+ S   +  Y+D+L +LY LM   R +    +E  I+NP+ES IF S P +L +  +
Sbjct: 63  LLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAVM 122

Query: 123 TSFICDYVRLIIIGNARSHEIEALMDEEIETILHDKLKPYHAITTMGDSFPAIGIVAAVL 182
             FI DY+RLII GN  + EIEALMDEEIET   +   P +++  +GDS PA GIVAAV+
Sbjct: 123 LDFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAAVM 182

Query: 183 GVIKAMGKINESPEVLGGLIGAALVGTMLGIILSYSICNPLASQVKIVRTKQHRLYIIVK 242
           GV+ A+   +     LG LI  A+VGT LGI+L+Y   +PLA+ ++    +  ++   VK
Sbjct: 183 GVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQCVK 242

Query: 243 QTLIAYMNGSVPQVALEYGRKTISNYERPSIDAVEQEM 280
            TL++ +NG  P +A+E+GRKT+ + ERPS   +E+ +
Sbjct: 243 ITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHV 280