Pairwise Alignments

Query, 244 a.a., flagellar basal body rod protein from Agrobacterium fabrum C58

Subject, 261 a.a., flagellar basal body rod protein FlgG from Pseudomonas simiae WCS417

 Score = 82.4 bits (202), Expect = 8e-21
 Identities = 72/262 (27%), Positives = 119/262 (45%), Gaps = 35/262 (13%)

Query: 1   MQSGLYVALSSQIALERRLTTISDNMANVNTVGFRGSEVKFDEMVAKNHNDMNAKVA--- 57
           M   LYVA +   A + +LTTIS+N+ANV+T GF+    +F +++ +      A+     
Sbjct: 1   MIPALYVAKTGLSAQDTQLTTISNNLANVSTTGFKRDRTEFQDLLYQIKRQPGAQSTQDS 60

Query: 58  ------FVSQGNDYLSTRQ----GAFEQTGNSFDFAIKGDAWFALDTPDGQI-LTRDGRF 106
                  +  G   + T++    G+ + TG   D A+ G  +F +  PDG    TRDG F
Sbjct: 61  ALPSGLQLGTGVQIVGTQKNFSAGSLQTTGQPLDLAVNGRGFFQVLQPDGTTGYTRDGTF 120

Query: 107 TMRPDGALISSSGYPVLDAGGGPIRLNPNGGPITVGLDGAIR---QNDTIAASLGIFQ-A 162
            +  +G ++++SG+ +  A    + +  N    TVG DG +      ++    +G  Q A
Sbjct: 121 HLNANGQVVTASGFVLEPA----VVVPDNAKTFTVGQDGTVSITVAGNSATQVIGNLQTA 176

Query: 163 DF----------SKGFLRHPNSGVKPVAQPVPVVNNHEVGVVQGYLEQSNVNGISQMTQL 212
           DF          +  FL   +SG   V    P +N      +Q  LE SNV+ + +M  +
Sbjct: 177 DFINPAGLQAIGNNLFLETASSGAPQVG--TPGLNGFGT-TLQRALETSNVSTVEEMVNM 233

Query: 213 IQVNRAFESISSMMRDTESTFG 234
           I   RA+E  S ++       G
Sbjct: 234 ITTQRAYEMNSKVISTANQMLG 255