Pairwise Alignments

Query, 473 a.a., flagellum-specific ATP synthase from Agrobacterium fabrum C58

Subject, 462 a.a., type III secretion system ATPase SctN from Paraburkholderia sabiae LMG 24235

 Score =  290 bits (743), Expect = 5e-83
 Identities = 178/417 (42%), Positives = 248/417 (59%), Gaps = 15/417 (3%)

Query: 39  VAHGGHVRTIAAGHYTVSGLSRHVRLGEFVAHRSATG--IHLGEVVRVEPDICYVCPIEP 96
           V   G +  +      V+G+   ++LGE    R+  G  +  GEV+    +   V P   
Sbjct: 40  VRQTGKIAEVVGTLIKVAGID--LKLGELCELRTPQGKLLQHGEVIGFTREHAVVSPFAQ 97

Query: 97  GEPIGIHDTVIR-KGAFRVSPDESWCGRTINALGEPIDGQGPLASGIVRRSISNNAPPSM 155
              +     VI  +    V   +   GR I+ALG+P+DG+GP+ S    R I  + P  M
Sbjct: 98  LSEVSRATHVIGLQRPLSVPVGDGLLGRVIDALGQPMDGRGPIESD-ESRPIFADPPNPM 156

Query: 156 TRKRVETPFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLLSMLAKADAFDKVVIALVG 215
           TR+ +E P  TGVR ID  + L  GQR+GIFA +GVGKSTLL MLA+    D  VIAL+G
Sbjct: 157 TRRMIEHPMVTGVRVIDAMTTLAEGQRMGIFAPAGVGKSTLLGMLARGAQCDINVIALIG 216

Query: 216 ERGREVREFIEDTMGDN-MSKSVAVVATSDESPMLRKMAPLSAVTIAEHFRDQGDNVLLI 274
           ERGREVREF+E  +G+  M++SV V ATSD S   R  A   A  IAE+FRD+G  VLL+
Sbjct: 217 ERGREVREFVELILGEKGMARSVVVCATSDRSSSERAKAAYVATAIAEYFRDEGKRVLLM 276

Query: 275 IDSVTRFAHAIREVAVASGEPPVARGYPASVFTELPRLLERAGPGAEGTGTITAIVSILV 334
           +DS+TRFA A RE+ +A+GEPP  RG+P SVF ELPRLLERAG G    G+ITA+ ++L 
Sbjct: 277 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMGER--GSITALYTVLA 334

Query: 335 DGDNHNDPIADSTRGILDGHIVLDRSLAEEGRYPPINPLASISRLAKKAWTPDQEKLVSR 394
           + ++ +DPIA+  RG+LDGH++L R +A + RYP I+ L S+SR+  +    +      R
Sbjct: 335 EDESGSDPIAEEVRGVLDGHLILSREIAAQNRYPAIDVLGSLSRVMSQVMPREFMASSGR 394

Query: 395 LKALVHRFEETRDLRLIGGYRPGTDPDLDMAVKQVPIIYETLKQLPDEPAAQDAYAD 451
           L+ L+ +  E   L  IG Y+PGT+   D A+ ++    + LK    +P   D+YAD
Sbjct: 395 LRKLLAKHREVDMLLQIGEYQPGTNALADEAIAKI----DALKAFLSQPT--DSYAD 445