Pairwise Alignments

Query, 306 a.a., flagella associated protein from Agrobacterium fabrum C58

Subject, 313 a.a., flagellin from Agrobacterium fabrum C58

 Score =  332 bits (850), Expect = 9e-96
 Identities = 187/322 (58%), Positives = 227/322 (70%), Gaps = 26/322 (8%)

Query: 1   MASILTNNNAMAALSTLRSIASDLSTTQDRISSGLKVGSASDNAAYWSIATTMRSDNKAL 60
           M SILTN  AM+AL TLR+I+  L  TQ R+SSGL+V SASDNAAYWSIATTMRSDN AL
Sbjct: 1   MTSILTNTAAMSALQTLRAISGQLEDTQSRVSSGLRVKSASDNAAYWSIATTMRSDNMAL 60

Query: 61  GAVSDALGMGAAKVDTASAGMDAAIKVVTDIKAKVVAAKEQGVDKTKVQEEVSQLLDQLK 120
            AV DALG+GAAKVD A + M++ ++VV +IK+K+VAA E+GVDKTK+QEE+ QL  QL+
Sbjct: 61  SAVQDALGLGAAKVDVAYSAMESTVEVVKEIKSKIVAATEEGVDKTKIQEEIDQLKKQLE 120

Query: 121 SIGTSASFNGENWLVSSANATKTVVSGFVRDAGGTVSVKTTDYAL--------DANSMLY 172
           SI   ASF+GENWL+ +    KTVVSGFVRD GGTVSV  TDY L         AN +  
Sbjct: 121 SIAQGASFSGENWLLGT--GAKTVVSGFVRDGGGTVSVTKTDYTLIDTTAGTTTANVLFG 178

Query: 173 TEGTPGTIDANSGILNATGATTTVGAKTYTQISVLDMNV--------GTDDLDNALYSVE 224
             G+P T+D   GI+   G        T + ISV D+++         T  + N L  VE
Sbjct: 179 LTGSPATLDTTKGIIGQPG--------TASGISVWDIDLKLFNSATPPTYTIGNLLTDVE 230

Query: 225 TALTKMTSAGAKLGSLSARIDLQSGFADKLSDTIEKGVGRLVDADMNEESTKLKALQTQQ 284
           TA   ++SA A LGS+  RI LQ  F  KL+D+I+KG+GRLVDADMNEESTKLKALQTQQ
Sbjct: 231 TAFQSISSASAALGSIKMRIGLQEDFVSKLTDSIDKGIGRLVDADMNEESTKLKALQTQQ 290

Query: 285 QLAIQALSIANSDSQNILSLFR 306
           QL IQ+LSIAN+ S+NILSLFR
Sbjct: 291 QLGIQSLSIANTSSENILSLFR 312