Pairwise Alignments

Query, 320 a.a., flaB from Agrobacterium fabrum C58

Subject, 687 a.a., flagellin, filament structural protein from Pseudomonas putida KT2440

 Score = 66.6 bits (161), Expect = 2e-15
 Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 20/256 (7%)

Query: 3   SIITNVAAMSALQTLRSIGQNMESTQARVSSGLRVGDASDNAAYWSIA----TTMRSDNM 58
           ++ TN+ +MS  + L      + +T  R+SSGL++  A D+AA   I+    T ++  ++
Sbjct: 4   TVNTNITSMSVQKNLNKSSDALGTTMGRLSSGLKINSAKDDAAGLQISNRLTTQIKGLSV 63

Query: 59  ALSSVSDALGLGAAKVDTASAGMSSAIDVVKEIKAKLVTATEEGVDRTKVQEEIGQLQKQ 118
           A+ + +D + + A   + A A   + +  ++E+  +    +    DR  +Q+E   L  +
Sbjct: 64  AVKNANDGISI-AQTAEGAMATSGNIMQRMRELALQSANGSNSDDDRASMQQEFTALSGE 122

Query: 119 LASISQGASFYGENWLVGVSTLGAATPGTDPDKSVVAGFVRASGGAVSVTTTKYALDNTA 178
           L  I+   +F G N L G  +  +   G + ++S+  G        VS T+ K       
Sbjct: 123 LTRIANTTTFGGRNLLDGTFSGSSFQVGANSNESISFGM-----KDVSATSMK------- 170

Query: 179 TGNVLFGSVDGTGTPDASGILGTVGTFTTVAAQSVYTLDITQYAAA--DRATNMAEALTL 236
            GN    SV G      + + G  G F T  A S     +    A   D+ T  A A  L
Sbjct: 171 -GNYNEASVAGGVATLQASVTGAAGKFGTNNAGSTSASVVGTAGAGVFDKPTIGAAAGNL 229

Query: 237 VENSLKAMTSAAAKLG 252
           V N     T+ AA  G
Sbjct: 230 VLNVGTTTTTIAAAAG 245



 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 67/271 (24%), Positives = 114/271 (42%), Gaps = 47/271 (17%)

Query: 49  IATTMRSDNMALSSVSDALGLGAAKVDTASAGMSSAIDVVKEIKAKLVTATEEGVDRTKV 108
           + T+    ++ L + S   G GA     A+ G++S        KA LV  T   ++  +V
Sbjct: 461 VLTSANGQDIKLDNGSGVTGQGAL----AAVGLNSGTT-----KAGLVADTSISLNGVEV 511

Query: 109 QEEIGQLQKQLASISQGASFYGENWLVGVSTLGAATPGTDPDKSVVAGFVRASGGAVSVT 168
           + + G     +A+                 ++ AA+ G +    V AG         S T
Sbjct: 512 KFKKGDDMDSIAA-----------------SINAASTGVNASVVVNAG---------SST 545

Query: 169 TTKYALDNTATGNVLFGSVDGTGTPDASGILGTVGTFTTVAAQS-VYTLDITQYAAADRA 227
            + +A D   T  V  GS +GTG   A G+    G  + V  +S V  L+IT   +A   
Sbjct: 546 LSLFA-DQDIT--VADGS-NGTGLA-ALGLTAVAGKTSAVEMESTVSNLNITDAQSAQ-- 598

Query: 228 TNMAEALTLVENSLKAMTSAAAKLGSLSMRIGLQEDFASKLSDSVEKGIGRLVDADMNEE 287
               +A+ +++ +++++ S  ++LG++  R          +S++      R+ DAD   E
Sbjct: 599 ----QAIQVLDGAMQSLDSQRSQLGAVQNRFDSTVANLQSISENSTAARSRIQDADFAAE 654

Query: 288 STRLKALQTQQQLGVQALSIANSNSESILSL 318
           +  L   QT QQ     LS AN    S+L L
Sbjct: 655 TAELSKQQTLQQASTAILSQANQLPSSVLKL 685