Pairwise Alignments

Query, 320 a.a., flaB from Agrobacterium fabrum C58

Subject, 400 a.a., Flagellin protein FlaA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 79.7 bits (195), Expect = 1e-19
 Identities = 94/402 (23%), Positives = 171/402 (42%), Gaps = 84/402 (20%)

Query: 1   MTSIITNVAAMSALQTLRSIGQNMESTQARVSSGLRVGDASDNAAYWSIATTM----RSD 56
           MT+I TNV +M+A + L +   ++ ++  R+SSGLRV  A D+AA  +I+  M    R  
Sbjct: 1   MTTINTNVMSMTAQRNLGTTSSSLATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGL 60

Query: 57  NMALSSVSDALGLGAAKVDTASAGMSSAIDVVKEIKAKLVTATEEGVDRTKVQEEIGQLQ 116
           N+A+ + +D + L A   + A   +   +  ++E+  +   A+    DRT +Q E+ QL 
Sbjct: 61  NVAVRNANDGISL-AQTAEGALGKVGDMLQRMRELSVQSANASNNSSDRTALQAEVTQLS 119

Query: 117 KQLASISQGASFYGENWL-------------------------------------VGVST 139
           +++  +++  +F G   L                                     +G +T
Sbjct: 120 QEIDRVAKTTAFNGTKLLDGSFANATFQVGANAGEGIAIDSIVSVKLDSMGSPSSMGYTT 179

Query: 140 LGAATP---GTDPD-KSVVAGFVRASG------GAVSVTTTKYALDNTATGNVLFGSVDG 189
           +  +T    G+  D  +V AG ++ +        AVS+   K A + T     +  +V+ 
Sbjct: 180 IQVSTEMVLGSLTDLTAVTAGTLQINAVPGDNTSAVSLGAIKAAANATERAGQIVDAVNA 239

Query: 190 ----TG-----TPDASGILGTVGTFTTVAAQSVYTLDITQYAAADRATNMAEALTLVENS 240
               TG     + +A+G L     F+   A S    D+  +  A      A A+      
Sbjct: 240 RSADTGVFAKLSYNAAGALTGYHLFSEKTAFSA-AADLAGFNTAATGNLQAGAMFAGAYD 298

Query: 241 LKAMTSAAAKLGSLSMRI----------------GLQEDFASKLS------DSVEKGIGR 278
           ++ ++ A+A    LS++I                 LQ  F + ++      +++    GR
Sbjct: 299 MRGISVASAGGAQLSLKIIDKAINDVNSSRANLGALQSRFENAVANIQITGENISAARGR 358

Query: 279 LVDADMNEESTRLKALQTQQQLGVQALSIANSNSESILSLFR 320
           +VDAD  +E++ L   Q  QQ G   ++ AN   + +LSL R
Sbjct: 359 IVDADFAKETSSLSRAQILQQAGTAMVAQANQAQQGVLSLLR 400