Pairwise Alignments

Query, 320 a.a., flaB from Agrobacterium fabrum C58

Subject, 430 a.a., flagellin protein FlaD from Agrobacterium fabrum C58

 Score =  206 bits (524), Expect = 8e-58
 Identities = 113/178 (63%), Positives = 130/178 (73%), Gaps = 1/178 (0%)

Query: 1   MTSIITNVAAMSALQTLRSIGQNMESTQARVSSGLRVGDASDNAAYWSIATTMRSDNMAL 60
           MTSI+TN AAM+ALQTLR I +N+E+TQARVSSG RV  A+DNAAYWSIATTMRSDN AL
Sbjct: 1   MTSILTNAAAMAALQTLRMIDKNLETTQARVSSGFRVETAADNAAYWSIATTMRSDNSAL 60

Query: 61  SSVSDALGLGAAKVDTASAGMSSAIDVVKEIKAKLVTATEEGVDRTKVQEEIGQLQKQLA 120
           S+V DALGLGAAKVDTA   + S I+VVK+IKAKLV A   G DR K+Q+EI QLQ+QL 
Sbjct: 61  SAVQDALGLGAAKVDTAYDALESTIEVVKQIKAKLVAAYGVGADRGKIQDEIKQLQEQLK 120

Query: 121 SISQGASFYGENWL-VGVSTLGAATPGTDPDKSVVAGFVRASGGAVSVTTTKYALDNT 177
           SIS+ ASF GENWL   +S  G         K VVA F R   G V VTT  Y LD++
Sbjct: 121 SISESASFSGENWLQASISNSGTPPVAESITKKVVASFTRTGSGNVGVTTVDYTLDSS 178



 Score =  129 bits (323), Expect = 2e-34
 Identities = 99/272 (36%), Positives = 134/272 (49%), Gaps = 22/272 (8%)

Query: 68  GLGAAKVDTASAGMSSAIDVVKEIKAKLVTATEEGVDRTKVQEEIGQLQKQLASISQGAS 127
           G G   V T    + S+  +      KL    +  V  +K + E+ Q        SQ   
Sbjct: 162 GSGNVGVTTVDYTLDSSTVLFDLSGGKLGILDKNAVFVSKTETEVMQTSTTAGKTSQAGY 221

Query: 128 FYGENWLVGVSTLGAATPGTDPDKSVVAG----FVRASGGA-VSVTTTKYALDNTATGNV 182
              +     +  L A T  T+ D ++ +     ++R +    V  T T  +   T     
Sbjct: 222 VVEKLSDAQIGALNATTTDTNTDPNLYSNGTDNYLRLAENVWVKATATNPSSGGTTVSPA 281

Query: 183 L--FGSVD-----GTGTPDASGILG-TVGTF------TTVAAQSVYTLDITQYAAADRAT 228
               GS D       GT  A+  LG +V T          AA   +    T Y  AD   
Sbjct: 282 YRDTGSTDWFYDVSAGTASANRSLGFSVSTLDLGNLDVVAAAMGGFAGGGTTYTGADAID 341

Query: 229 NMAEALTLVENSLKAMTSAAAKLGSLSMRIGLQEDFASKLSDSVEKGIGRLVDADMNEES 288
            M   ++ V+  L+AMTS A+ LGSL  RI +QE+F S L D ++KG+GRLVDADMNEES
Sbjct: 342 MM---MSFVDKQLEAMTSTASSLGSLQSRISMQENFVSSLMDVIDKGVGRLVDADMNEES 398

Query: 289 TRLKALQTQQQLGVQALSIANSNSESILSLFR 320
           TRLKALQTQQQLG+QALSIAN+N+E+IL LF+
Sbjct: 399 TRLKALQTQQQLGIQALSIANANAENILQLFK 430



 Score = 23.9 bits (50), Expect = 0.008
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 59  ALSSVSDALGLGAAKVDTASAGMSSAIDVVKEIKAKLVTA-TEEGVDRTKVQEEIGQLQK 117
           A++S + +LG   +++      +SS +DV+ +   +LV A   E   R K  +   QL  
Sbjct: 353 AMTSTASSLGSLQSRISMQENFVSSLMDVIDKGVGRLVDADMNEESTRLKALQTQQQLGI 412

Query: 118 QLASIS 123
           Q  SI+
Sbjct: 413 QALSIA 418