Pairwise Alignments

Query, 320 a.a., flaB from Agrobacterium fabrum C58

Subject, 313 a.a., flagellin from Agrobacterium fabrum C58

 Score =  364 bits (934), Expect = e-105
 Identities = 206/326 (63%), Positives = 249/326 (76%), Gaps = 20/326 (6%)

Query: 1   MTSIITNVAAMSALQTLRSIGQNMESTQARVSSGLRVGDASDNAAYWSIATTMRSDNMAL 60
           MTSI+TN AAMSALQTLR+I   +E TQ+RVSSGLRV  ASDNAAYWSIATTMRSDNMAL
Sbjct: 1   MTSILTNTAAMSALQTLRAISGQLEDTQSRVSSGLRVKSASDNAAYWSIATTMRSDNMAL 60

Query: 61  SSVSDALGLGAAKVDTASAGMSSAIDVVKEIKAKLVTATEEGVDRTKVQEEIGQLQKQLA 120
           S+V DALGLGAAKVD A + M S ++VVKEIK+K+V ATEEGVD+TK+QEEI QL+KQL 
Sbjct: 61  SAVQDALGLGAAKVDVAYSAMESTVEVVKEIKSKIVAATEEGVDKTKIQEEIDQLKKQLE 120

Query: 121 SISQGASFYGENWLVGVSTLGAATPGTDPDKSVVAGFVRASGGAVSVTTTKYAL-DNTA- 178
           SI+QGASF GENWL+G              K+VV+GFVR  GG VSVT T Y L D TA 
Sbjct: 121 SIAQGASFSGENWLLGTGA-----------KTVVSGFVRDGGGTVSVTKTDYTLIDTTAG 169

Query: 179 --TGNVLFGSVDGTGTPDAS-GILGTVGTFTTVAAQSVYTLDITQYAAADRAT-NMAEAL 234
             T NVLFG      T D + GI+G  GT + +   SV+ +D+  + +A   T  +   L
Sbjct: 170 TTTANVLFGLTGSPATLDTTKGIIGQPGTASGI---SVWDIDLKLFNSATPPTYTIGNLL 226

Query: 235 TLVENSLKAMTSAAAKLGSLSMRIGLQEDFASKLSDSVEKGIGRLVDADMNEESTRLKAL 294
           T VE + ++++SA+A LGS+ MRIGLQEDF SKL+DS++KGIGRLVDADMNEEST+LKAL
Sbjct: 227 TDVETAFQSISSASAALGSIKMRIGLQEDFVSKLTDSIDKGIGRLVDADMNEESTKLKAL 286

Query: 295 QTQQQLGVQALSIANSNSESILSLFR 320
           QTQQQLG+Q+LSIAN++SE+ILSLFR
Sbjct: 287 QTQQQLGIQSLSIANTSSENILSLFR 312