Pairwise Alignments

Query, 737 a.a., Chemotaxis protein histidine kinase from Agrobacterium fabrum C58

Subject, 764 a.a., chemotaxis histidine kinase protein cheAII from Caulobacter crescentus NA1000 Δfur

 Score =  286 bits (733), Expect = 2e-81
 Identities = 171/497 (34%), Positives = 277/497 (55%), Gaps = 27/497 (5%)

Query: 250 SDASADEEELPMIPVPFDLSALDGDAQDEPA----VATPAMEDAYVAAT-----VEAAVA 300
           SD +A  E+ P+   P  L+A D  A +       V+   +E A++AA        A   
Sbjct: 123 SDGAAPSEQSPVAAEPEPLAA-DVAAPERTLRPGEVSLEELEAAFLAAEGPVFDAPAPPV 181

Query: 301 TTQIAQSVNAAIEKREAAAAPAAAQANANAAANASAGQTIRVDLDRVDRLINLVGELVIN 360
            T  A S  A  E  +  +AP A        + +   QTIRV +D ++ ++ LV ELV+ 
Sbjct: 182 ETPSAASPAATFEPDQTDSAPEAL------VSESLGPQTIRVGVDVLEDMMTLVSELVLT 235

Query: 361 QAMLSQSVIENDASGTSAVNMGLDELQQLTREIQDSVMAIRAQPVKPVFQRMSRIVREVA 420
           +  L Q    N   G       L  L  +T E+QDSVM  R QP+   ++++ R+VR+++
Sbjct: 236 RNQLLQL---NRGRGDETFTPPLQRLSSITGELQDSVMKTRMQPIGQAWKKLPRLVRDLS 292

Query: 421 DMIGKQIRLVTEGENTEVDKTVIDKLAEPLTHMIRNAVDHGIETPEKREAAGKNPEGTIK 480
             +GK I LV EGE TE+D+ V++++ +PLTHM+RN+ DHG+E PE R AAGK   G I 
Sbjct: 293 GELGKPIELVMEGEATELDRQVLEQIRDPLTHMVRNSADHGLEGPEARRAAGKPEAGLIH 352

Query: 481 LSAKHRSGRILIELQDDGAGINRERVRQKAIDNDLI--AADANLTDEEIDNLIFAPGFST 538
           LSA H  G I+I L+DDG G++  R+R+KAI+  ++  A    +T+ ++  LIFAPGFST
Sbjct: 353 LSAYHEGGAIVIRLRDDGRGLDTARIREKAIEKGIVGRAEAETMTEAQVHRLIFAPGFST 412

Query: 539 ADKISDISGRGVGMDVVKRSIQALGGRISISSRPGLGSTFTMSLPLTLAVLDGMVVTVAG 598
           A  ++++SGRGVGMDVV+ +I+ +GG+I + S  G G   T+ +PLTLA++  +++  AG
Sbjct: 413 AAVVTNVSGRGVGMDVVRSNIEQIGGQIELQSTLGQGCVVTVKIPLTLAIVSALIIRAAG 472

Query: 599 QTLVVPLTAIVETLQPEAKNIHSFG--SNQRLISIRNSFCPLVDVGRVLNFRPTQADPVE 656
           +   VP  ++ E ++  A + H F    + R++ +R    PL+D+   L          E
Sbjct: 473 ERFAVPQASVQELVKVSADSDHRFEEIEHVRMLRLREQLIPLIDLSEELGRERRH----E 528

Query: 657 GVALLVESEGGGQRALMVDAIQGQRQVVIKSLEANYTHVPGIAAATILGDGRVALILDVD 716
              +L+   G  +  ++V+ +    ++V+K L +    +P  + AT+LGDG V LI+D +
Sbjct: 529 AKFVLIMRVGAHRFGVLVEEVIDTEEIVVKPLASVLRTIPVFSGATLLGDGSVVLIIDPN 588

Query: 717 AIVSASRGQPLKQEMSL 733
            +   +   P + + ++
Sbjct: 589 GLSDRAGDMPARAQKAI 605



 Score = 65.9 bits (159), Expect = 8e-15
 Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 4/158 (2%)

Query: 5   LLKLNDGDRDPETVNAVFRAVHSIKGGAGAFGLDDLVAFAHVFETTLDCVRSNKLEPTQD 64
           L++      D   ++ +FR VH++KG  G  GL  L A AH  ET L   R  +LE +  
Sbjct: 23  LVRFEARPEDRAALDKIFRLVHTLKGACGFLGLGRLEAIAHAGETLLGRFRDGRLEVSSQ 82

Query: 65  VLKVMLRSADVLADLTNAARDGGSVDESRTRGLVKELEALANGEAVPASAPAPVAVKAPE 124
            +  +L + D +  + +   D G   E     L++ LEA ++G A   S  +PVA + PE
Sbjct: 83  AVTAVLSAIDRIKMILDGLGDLGREPEGDDTALIQALEAFSDGAA--PSEQSPVAAE-PE 139

Query: 125 PVKAP-AAPKPTDESGFEPIPFSFSDFADETTPLMEVP 161
           P+ A  AAP+ T   G   +    + F     P+ + P
Sbjct: 140 PLAADVAAPERTLRPGEVSLEELEAAFLAAEGPVFDAP 177