Pairwise Alignments

Query, 598 a.a., acyl-CoA dehydrogenase from Agrobacterium fabrum C58

Subject, 598 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas fluorescens GW456-L13

 Score =  614 bits (1584), Expect = e-180
 Identities = 312/598 (52%), Positives = 400/598 (66%), Gaps = 2/598 (0%)

Query: 1   MPVYKAPVKDTLFILNDVLGLERYNNLPGFEDATPDMIEAITGEAAKLAEERLFPLNLSG 60
           MP YKAP++D  F+++ V          G  DA+PDM+ AI  E AK  E  L PLN SG
Sbjct: 1   MPEYKAPLRDMRFLIDHVFDFHSNYAALGATDASPDMVNAILEEGAKFCENVLSPLNRSG 60

Query: 61  DQQGCKRADDGSVSVPDGFKAAYDAYCEGGWIGLAVPSEFGGQGLPYTLHAAIGEYMSSA 120
           D++GC   D+G V+ P GFK A+  Y EGGW GLA    +GGQGLP +L   I E ++S+
Sbjct: 61  DEEGC-HFDNGVVTTPAGFKQAFAQYVEGGWHGLAADPVYGGQGLPISLGLVISEMVASS 119

Query: 121 NLSLMMYPGLTQGAIAAVLVHGTQEQKETYLPKMVEGTWSGTMNLTEPHCGTDLGLLRTK 180
           N S  MYPGLT GA++A+  HGT+ QK+TYL K+  G W+GTM LTE HCGTDLG+++T+
Sbjct: 120 NTSWGMYPGLTHGAMSAIHAHGTEAQKKTYLKKLTAGQWTGTMCLTEAHCGTDLGIIKTR 179

Query: 181 AVPQGDGSYKISGQKIFISAGEHSMTDNIVHLVIARIEGAPEGTKGISLFIVPKFLVKED 240
           AVP  DGSY ISG KIFISAGEH M+ NI+HLV+A++  AP GTKGISLFIVPK+L    
Sbjct: 180 AVPAADGSYAISGSKIFISAGEHDMSANIIHLVLAKLPDAPAGTKGISLFIVPKYLPDAT 239

Query: 241 GTLGERNGVTCGAIEHKMGIHGNATCVMNYDDATGYLLGAENKGLSAMFVMMNEARLGVG 300
           G  GERNGV+CG+IEHKMGI  +ATCV+N+D+A G+L+G  NKGL+ MF MMN ARLG G
Sbjct: 240 GEAGERNGVSCGSIEHKMGIKASATCVLNFDEAKGFLIGEPNKGLNCMFTMMNHARLGTG 299

Query: 301 LQGLSVGEIAYQNAVEYARDRIQGRSLSGAKFPDKKADPIIVHPDIRRTLMTIKAYNEAG 360
           +QGL +GE ++Q A++YA DR+Q RSL+G K P+K ADPIIVHPD+RR L+T+KA+NE  
Sbjct: 300 MQGLCLGEASFQGAIKYANDRLQMRSLTGPKAPEKVADPIIVHPDVRRMLLTMKAFNEGN 359

Query: 361 RAFLLWTALQSDIAHRAADEKQRQAADDLLGLVTPILKGVLTDKGFDHAVMAQQVFGGHG 420
           RA   +TA   D+AH + DE  R+ A+DLL  +TPI K  +TD G +      QVFGGHG
Sbjct: 360 RALTYFTAQLLDVAHLSPDETARRDAEDLLAFLTPICKAFMTDTGLEVTNHGMQVFGGHG 419

Query: 421 YIEEHGMSQYVRDARITMIYEGANGIQALDLVGRKLGMNGGRAVMALFKEIGDFCEENRA 480
           +I E GM Q VRD RI  IYEG NGIQALDL+GRK+  + G+ +    K +  FC  N  
Sbjct: 420 FIREWGMEQLVRDCRIAPIYEGTNGIQALDLLGRKVLGSQGKLLRGFTKIVHKFCAANAE 479

Query: 481 DEKLSLYTKGLKKGLNDLQAATMWFMQNAMAKPDNAGAGSTDYMHLFGIVVLGYMQALMA 540
             +L+ Y   L +        T      AM  PD  GA S DY+   G ++LGY+   MA
Sbjct: 480 HPQLAGYVAQLNQLNQQWGELTTRVGMAAMKNPDEVGAASVDYLMYSGYIILGYLWLRMA 539

Query: 541 KAASEALAAGSTSDEDFLKTKLVTAKFYMERIMPETALRKARIETGADTMMELAAEAF 598
             A   L AGS  D DF + KL T +FY +R++P TA  +A +E G+D +M+L AE F
Sbjct: 540 LVAQAQLDAGS-GDGDFCRAKLATNEFYFKRLLPRTAAHRAAVEAGSDCLMQLPAELF 596